Pairwise Alignments

Query, 470 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase from Acinetobacter radioresistens SK82

 Score =  169 bits (429), Expect = 1e-46
 Identities = 123/437 (28%), Positives = 216/437 (49%), Gaps = 26/437 (5%)

Query: 1   MTVQTFTPNQTTTLETAKKTIAEQSQNSQTTGNKIGFVSLGCPKNLVDSERILTQLR-TE 59
           MTVQTF PN          T  + +        K+   + GC  N  DS R+   L  + 
Sbjct: 1   MTVQTFIPNGAKAASENTVTQPQHTPADNMPVKKLYIETQGCQMNEYDSHRMADLLGDSH 60

Query: 60  GYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALK---ENGKVI--VTGCLGARE-D 113
           GY + ++  D+D++++NTC   + A ++    +G   K   +N  ++  V GC+ ++E D
Sbjct: 61  GYILTSNPADADILLMNTCSIREKAQEKVFSELGRWRKLKDQNPDLVIGVGGCVASQEGD 120

Query: 114 EIRQVHPNVLGITGPHAYQNVLEHVHQYA-----PKPAHNPFTSL-VPD-HGVKLTPK-- 164
            I++  P V  + GP     + + + Q+      PK        +  PD       P+  
Sbjct: 121 NIQKRAPYVDMVFGPQTLHRLPQMLDQHIDQLEKPKKEKIKLVDISFPDIEKFDFLPEPR 180

Query: 165 ---HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDT 221
              + A++ I EGC+  C+FC++P  RG+ VSRP+ +++ E   L   GV+E+ ++ Q+ 
Sbjct: 181 VEGYKAFVSIMEGCSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAEKGVREINLLGQNV 240

Query: 222 SAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAE-GK 280
           + Y  +T     F        ++  L  E+  +G  VR    +P    D++I    +  +
Sbjct: 241 NGYRGET-----FEGTICTFADLLRLVAEIPGIGR-VRYTTSHPLEFNDDLIQCYRDLPQ 294

Query: 281 VLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEED 340
           ++ +L +P Q  S  VL+ MKR    +  +E+I K R++ P++ + S FI+GFPGET+++
Sbjct: 295 MVSHLHLPVQSGSNDVLQAMKRNHTIDVYIEKIAKLRKVRPDMHLSSDFIIGFPGETDQN 354

Query: 341 FQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRFERFMLVQQEISAAKL 400
           F+    +++E   D    F YS   G  A+E+ D  PE+VK++R  R     ++ S AK 
Sbjct: 355 FEETYQFIQEMDFDHSYSFIYSKRPGTPASELADDTPEEVKKERLARVQQWIKQSSIAKT 414

Query: 401 QKRIGSTMQVLIDEVDE 417
               G+  +VLI+ + E
Sbjct: 415 NAMQGTIQRVLIENISE 431