Pairwise Alignments

Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., putative ABC transporter ATP-binding protein YheS from Xanthobacter sp. DMC5

 Score =  375 bits (962), Expect = e-108
 Identities = 203/527 (38%), Positives = 315/527 (59%), Gaps = 12/527 (2%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           MI    I    G + +  +ASA +  G+KVGLVG NG GK+TLF ++  + T D G  S 
Sbjct: 1   MIRLDNISKQNGRQLVFIEASAALLKGEKVGLVGPNGAGKTTLFRMMTGQETPDEGQVSA 60

Query: 61  PAHWELAWVAQETPALD-RTALEYVIDGD-------REYRELERQLMDAEAADNGTKVAD 112
                + + +Q+   +  R+AL  V+DG         E +E+E  L D +  D    + +
Sbjct: 61  DRGITIGYFSQDVGEMSGRSALAEVMDGAGPVSVVAAELKEIEAALGDPDRMDEMDALVE 120

Query: 113 LHGKI----EMVGGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRS 168
            +G++    E +GGY++  RA+E+L GLGF+QE M   + + SGGW+MR+ LA+ L+ R 
Sbjct: 121 RYGEVQARFEELGGYALEGRAAEVLAGLGFSQEMMDGDVGKLSGGWKMRVALARILLMRP 180

Query: 169 DLLLLDEPTNHLDLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYT 228
           D++LLDEP+NHLD+++++WLE +L+ + G L++ SHDR F++ IVN+IV I+  +LN Y+
Sbjct: 181 DVMLLDEPSNHLDIESLIWLESFLKGFDGALMMTSHDRAFMNRIVNKIVEIDAGSLNTYS 240

Query: 229 GNYSSFETQRAQKMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALERMEK 288
           G+Y  +  QRA    QQQA Y++QQ  +A   ++I+RF+ +AS A Q QSR+K LE++++
Sbjct: 241 GDYEFYAGQRAMNEKQQQAQYERQQAMLAKEIAFIERFKARASHAAQVQSRVKKLEKIDR 300

Query: 289 VLPAQFDNPFSFEFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNG 348
           V P +     +FEF         +  +  V   YG  +I E +  ++    R  ++G NG
Sbjct: 301 VEPPRRREAVAFEFAPAPRSGEDVASLKGVHKRYGSKVIYEGLDFHIRRRERWCVMGVNG 360

Query: 349 AGKSTLIKLLSGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKNEL 408
           AGKSTL+KL++G   P  G       VK+GYFAQH ++ L  E T  + +    P   + 
Sbjct: 361 AGKSTLLKLIAGAATPDDGTVNVGGSVKMGYFAQHAMDLLEGERTVFETLEDAFPQAGQG 420

Query: 409 ELRNYLGSFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQA 468
            LR   G FGF G+ A ++    SGGEKARLV+A +++  PN L+LDEPTNHLD+  ++ 
Sbjct: 421 ALRTLAGCFGFSGDDAEKRCRVLSGGEKARLVMAKMLFDPPNFLVLDEPTNHLDMTTKEM 480

Query: 469 LTLALQSYEGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDY 515
           L  AL +YEG M+ VSHDR+ L A ++ +  + +  +  ++G   +Y
Sbjct: 481 LVEALANYEGTMLFVSHDRHFLAALSNRVLELTEDGIHQYNGGYTEY 527



 Score = 87.8 bits (216), Expect = 1e-21
 Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 30/230 (13%)

Query: 12  GGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSKPAHWELAWVAQ 71
           G K + E     I   ++  ++G NG GKSTL  L+    T D G+ +     ++ + AQ
Sbjct: 335 GSKVIYEGLDFHIRRRERWCVMGVNGAGKSTLLKLIAGAATPDDGTVNVGGSVKMGYFAQ 394

Query: 72  ETPALDRTALEYVIDGDREYRELERQLMDAEAADNGTKVADLHGKIEMVGGYSIRARASE 131
              A+D      +++G+R                  T    L       G  ++R  A  
Sbjct: 395 H--AMD------LLEGER------------------TVFETLEDAFPQAGQGALRTLAG- 427

Query: 132 LLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVMWLERW 191
                GF+ +         SGG + RL +A+ L    + L+LDEPTNHLD+     L   
Sbjct: 428 ---CFGFSGDDAEKRCRVLSGGEKARLVMAKMLFDPPNFLVLDEPTNHLDMTTKEMLVEA 484

Query: 192 LQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSFETQRAQK 241
           L +Y GT++ +SHDR FL  + NR++ +    +++Y G Y+ +  +  Q+
Sbjct: 485 LANYEGTMLFVSHDRHFLAALSNRVLELTEDGIHQYNGGYTEYVARTGQE 534