Pairwise Alignments

Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., putative ABC transporter ATP-binding protein YheS from Xanthobacter sp. DMC5

 Score =  434 bits (1117), Expect = e-126
 Identities = 244/632 (38%), Positives = 367/632 (58%), Gaps = 13/632 (2%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           MI   +I L   G+ L++ AS  +    +VG+VG+NG GK+TLF  L  EL +++G+   
Sbjct: 1   MIVLDDISLRLAGRLLIDHASVALPENARVGVVGRNGSGKTTLFKALVGELELESGAIRL 60

Query: 61  PAHWELAWVAQETPALDRTALEYVIDGDREYRELERQLMDAEAADNGTKVADLHGKIEMV 120
           P    +  VAQE PA   + ++ V+  D E   L   L + E   +  ++ ++  ++  +
Sbjct: 61  PNRTRIGRVAQEAPAGPDSLIDRVLAADTERAAL---LKERETTQDPNRMGEIEMRLLDI 117

Query: 121 GGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEPTNHL 180
           G ++  ARA+ +L GLGF +       ++FSGGWRMR+ LA  L    DLLLLDEPTN+L
Sbjct: 118 GAHAAPARAATILAGLGFDESAQQRPCSEFSGGWRMRVALAALLFTEPDLLLLDEPTNYL 177

Query: 181 DLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSFETQRAQ 240
           DL+  +WL+ +L  YP T+ILISHDRD LD  V+ I+H+  Q L  Y G ++SF+ QR +
Sbjct: 178 DLEGTLWLQDYLAHYPRTVILISHDRDLLDESVDHILHLTGQKLTLYKGGFTSFDRQRRE 237

Query: 241 KMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALERMEKVLPAQFDNPFSF 300
           ++L  Q   +KQ+ Q AHM+S++ RFR KA+KA+QAQSR+KAL RME +     +   + 
Sbjct: 238 RLLLDQKARKKQEMQRAHMESFVARFRAKATKAKQAQSRLKALARMEPLAAQVSEEAAAI 297

Query: 301 EFREPAALPN-PILMMDQVAAGY-GDHLILEKIRLNLVPGSRIGLLGRNGAGKSTLIKLL 358
             R P  L + PI+++++VA GY     IL+ + L +    RI LLG NG GKST  KLL
Sbjct: 298 SIRHPEKLLSPPIVVLEKVAVGYVPGRPILQNLNLRIDEDDRIALLGPNGNGKSTFAKLL 357

Query: 359 SGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKNELELRNYLGSFG 418
           +  LK +SG    +  +++ Y AQHQ++ L P ++P QH+ ++ P   E  +R      G
Sbjct: 358 ADRLKEESGRVVRADKLEVAYLAQHQIDELIPGDSPAQHVRRLMPAAPEARVRARAAEMG 417

Query: 419 FHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQSYEG 478
           F G  A  KV+  SGGEKARL+L L  +  P+LL+LDEPTNHLD++ R AL  A+  + G
Sbjct: 418 FSGGAADTKVSSLSGGEKARLLLGLATFHGPHLLILDEPTNHLDIEARAALIEAINDFPG 477

Query: 479 AMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYKWLTDQQKAERKETQPTNTANS 538
           A+++VSHDR+LL A  + L+ V    V  +DGDL+ Y   +  +   +R   +     + 
Sbjct: 478 AVILVSHDRHLLEACAERLWRVSGGTVKAYDGDLDQYKAEVLSRSDGDRMTDKGRKDRSE 537

Query: 539 ANSAAAKKEQKRREADFRKLTAPIRKKLTQLEEKLDKLNHVVSEMEAQLSDTSLYEAQNK 598
             + AA        A  R  T P++K++ +LE  +DKL   +  ++A+LSD  L+ A+  
Sbjct: 538 TKAEAA-------PAPRRIATGPLKKRIRELEGAVDKLTKQIEGLDAKLSDAGLHAAK-P 589

Query: 599 ATLTEVLAKQAAAKSELEQVELEWMAEQETLE 630
                   ++A A  +L Q E EW+     LE
Sbjct: 590 LDAARFAKERAEAAEKLAQAEEEWLEVSAELE 621