Pairwise Alignments

Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., putative ATP-binding component of a transport system from Pseudomonas putida KT2440

 Score =  309 bits (792), Expect = 2e-88
 Identities = 173/525 (32%), Positives = 291/525 (55%), Gaps = 11/525 (2%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           MI+ + I +  G KPL E  S   + G++ GL+G NGCGKST   +L  +L   AG    
Sbjct: 1   MISTANITMQFGSKPLFENVSVKFNNGNRYGLIGANGCGKSTFMKILGGDLEPSAGQVML 60

Query: 61  PAHWELAWVAQETPALDR-TALEYVIDGDREYRELERQL-----MDAEAADNGTKVADLH 114
             +  L  + Q+  A +  T ++ VI G  +  +++ +      +     ++G  VA+L 
Sbjct: 61  EPNTRLGKLRQDQFAYEEFTVIDTVIMGHGQLWKVKAERDRIYSLPEMTEEDGMAVAELE 120

Query: 115 GKIEMVGGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLD 174
            +   + GY+  +RA ELL GLG   EQ    +++ + GW++R+ LAQAL    D+LLLD
Sbjct: 121 TEFAEMDGYTAESRAGELLLGLGIPLEQHFGPMSEVAPGWKLRVLLAQALFSDPDVLLLD 180

Query: 175 EPTNHLDLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSF 234
           EPTNHLD++ + WLE  L +   T+I+ISHDR FL+ +   +  ++   L  + GNY  +
Sbjct: 181 EPTNHLDINTIRWLETILTARNSTMIIISHDRHFLNSVCTHMADLDYGELRLFPGNYDEY 240

Query: 235 ETQRAQKMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALERME--KVLPA 292
            T   Q   Q  +   K++ Q+A +Q+++ RF   ASKA+QA SR K +++++  +V P+
Sbjct: 241 MTAATQSREQLLSDNAKKKAQIAELQTFVSRFSANASKAKQATSRAKQIDKIQLAEVKPS 300

Query: 293 QFDNPFSFEFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNGAGKS 352
              +PF   F +   L    ++++++A  + D ++ +   + +  G R+ ++G NG GK+
Sbjct: 301 SRVSPF-IRFEQAKKLHRQAVVVEKMAKAFDDKVLFKNFDITVEAGERVAIIGPNGIGKT 359

Query: 353 TLIKLLSGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKNELELRN 412
           TL++ L GE+ P +G   ++   ++GY+AQ        + T    M Q      E  +R 
Sbjct: 360 TLLRTLVGEMTPDAGSVKWTDSAEVGYYAQDHAHDFEDDMTLFDWMGQWT--SGEQVIRG 417

Query: 413 YLGSFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLA 472
            LG   F  ++ L+ V   SGGE+ R++   ++ QKPN+L++DEPTNHLD++  +AL LA
Sbjct: 418 TLGRMLFSNDEILKSVKVISGGEQGRMLFGKLILQKPNVLVMDEPTNHLDMESIEALNLA 477

Query: 473 LQSYEGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYK 517
           L++Y G ++ VSHDR  + +    +  +    V  F G  +DY +
Sbjct: 478 LENYPGTLLFVSHDREFVSSLATRIIELSADGVVDFSGTYDDYLR 522



 Score = 92.8 bits (229), Expect = 3e-23
 Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 46/275 (16%)

Query: 322 YGDHLILEKIRLNLVPGSRIGLLGRNGAGKSTLIKLLSGELKPQSGDCTYSQGVKIGYFA 381
           +G   + E + +    G+R GL+G NG GKST +K+L G+L+P +G        ++G   
Sbjct: 11  FGSKPLFENVSVKFNNGNRYGLIGANGCGKSTFMKILGGDLEPSAGQVMLEPNTRLGKLR 70

Query: 382 QHQ--------LETLH-------------------PEETPLQHMMQIAPDKNELELRNY- 413
           Q Q        ++T+                    PE T    M     +    E+  Y 
Sbjct: 71  QDQFAYEEFTVIDTVIMGHGQLWKVKAERDRIYSLPEMTEEDGMAVAELETEFAEMDGYT 130

Query: 414 --------LGSFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDM 465
                   L   G   E+    ++  + G K R++LA  ++  P++LLLDEPTNHLD++ 
Sbjct: 131 AESRAGELLLGLGIPLEQHFGPMSEVAPGWKLRVLLAQALFSDPDVLLLDEPTNHLDINT 190

Query: 466 RQALTLALQSYEGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDYYKWLTD---- 521
            + L   L +    M+I+SHDR+ L +    +  +   ++  F G+ ++Y    T     
Sbjct: 191 IRWLETILTARNSTMIIISHDRHFLNSVCTHMADLDYGELRLFPGNYDEYMTAATQSREQ 250

Query: 522 ------QQKAERKETQPTNTANSANSAAAKKEQKR 550
                 ++KA+  E Q   +  SAN++ AK+   R
Sbjct: 251 LLSDNAKKKAQIAELQTFVSRFSANASKAKQATSR 285