Pairwise Alignments

Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., ABC transporter ATP-binding protein from Magnetospirillum magneticum AMB-1

 Score =  370 bits (949), Expect = e-106
 Identities = 201/526 (38%), Positives = 308/526 (58%), Gaps = 11/526 (2%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           MI F  I      + L   +SA ++ G+KVGLVG NG GK+TLF ++  E   DAG  S 
Sbjct: 1   MIRFENISKQNSHRILFLDSSAALNRGEKVGLVGPNGAGKTTLFRMITGEEVPDAGQVSI 60

Query: 61  PAHWELAWVAQETPALD-RTALEYVIDGD-------REYRELERQLMDAEAADNGTKV-- 110
                + +  Q+   +  R+A+  V+DG         E  ELE  + D +  D    +  
Sbjct: 61  EKQVSIGYFNQDVGEMSGRSAVAEVMDGAGPVSTVAAELAELEAAMCDPDRDDMDAVIER 120

Query: 111 -ADLHGKIEMVGGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSD 169
             ++  + E +GGY +  RA E+L GL F+QE M   +   SGGW+MR+ L + L+ R D
Sbjct: 121 FGEVQARFEELGGYELEGRAREVLAGLSFSQEMMDGDVGALSGGWKMRVALGRILLMRPD 180

Query: 170 LLLLDEPTNHLDLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTG 229
            +LLDEP+NHLD+++++WLE +L+ Y G L++ SHDR+FL+ IV +I+ I+  +L  Y+G
Sbjct: 181 AMLLDEPSNHLDIESLIWLEDFLKGYDGALLMTSHDREFLNRIVGKIIEIDGGSLTTYSG 240

Query: 230 NYSSFETQRAQKMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALERMEKV 289
           +Y+ +E QRA    QQQA +++QQ  +A    +I+RF+ +AS A Q QSR+K L+++E+ 
Sbjct: 241 DYAFYERQRALNEKQQQAQFERQQAMLAKEIKFIERFKARASHAAQVQSRVKKLDKIERF 300

Query: 290 LPAQFDNPFSFEFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNGA 349
            P +     +F+F       + + ++  V  GYG   I + + L +    R  ++G NGA
Sbjct: 301 EPPRRRQTVAFDFPPAPRSGDDVAVLKNVHKGYGSKAIYQGLDLIIRRKERWCVMGVNGA 360

Query: 350 GKSTLIKLLSGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMMQIAPDKNELE 409
           GKSTL+KL++G  +P SG       V++GYF+QH +E L  + T  + +    P  N+  
Sbjct: 361 GKSTLLKLIAGAAEPDSGTVAVGASVRMGYFSQHAMELLDGDATVFEALESAFPVANQGS 420

Query: 410 LRNYLGSFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQAL 469
           LR   G FGF G+   +K    SGGEKARLV+A++++  PN L+LDEPTNHLDLD ++ L
Sbjct: 421 LRALAGCFGFSGDDVEKKCRVLSGGEKARLVMAIMLFNPPNFLVLDEPTNHLDLDTKEML 480

Query: 470 TLALQSYEGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDY 515
             AL +YEG M+ VSHDR+ L A ++ +  +    V  + G   +Y
Sbjct: 481 IKALAAYEGTMLFVSHDRHFLAALSNRVLELTPEGVHQYSGGYTEY 526



 Score = 93.2 bits (230), Expect = 3e-23
 Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 52/282 (18%)

Query: 338 GSRIGLLGRNGAGKSTLIKLLSGELKPQSGDCTYSQGVKIGYFAQ------------HQL 385
           G ++GL+G NGAGK+TL ++++GE  P +G  +  + V IGYF Q              +
Sbjct: 27  GEKVGLVGPNGAGKTTLFRMITGEEVPDAGQVSIEKQVSIGYFNQDVGEMSGRSAVAEVM 86

Query: 386 ETLHPEETPLQHMMQIA-----PDKNELEL------------------------RNYLGS 416
           +   P  T    + ++      PD+++++                         R  L  
Sbjct: 87  DGAGPVSTVAAELAELEAAMCDPDRDDMDAVIERFGEVQARFEELGGYELEGRAREVLAG 146

Query: 417 FGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALTLALQSY 476
             F  E     V   SGG K R+ L  I+  +P+ +LLDEP+NHLD++    L   L+ Y
Sbjct: 147 LSFSQEMMDGDVGALSGGWKMRVALGRILLMRPDAMLLDEPSNHLDIESLIWLEDFLKGY 206

Query: 477 EGAMVIVSHDRYLLRATTDDLYLVHDHQVGPFDGDLNDY--YKWLTDQQKAERKETQPTN 534
           +GA+++ SHDR  L      +  +    +  + GD   Y   + L ++Q+  + E Q   
Sbjct: 207 DGALLMTSHDREFLNRIVGKIIEIDGGSLTTYSGDYAFYERQRALNEKQQQAQFERQQAM 266

Query: 535 TANSAN---------SAAAKKEQKRREADFRKLTAPIRKKLT 567
            A             S AA+ + + ++ D  +   P R++ T
Sbjct: 267 LAKEIKFIERFKARASHAAQVQSRVKKLDKIERFEPPRRRQT 308