Pairwise Alignments

Query, 638 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Kangiella aquimarina DSM 16071

 Score =  285 bits (729), Expect = 4e-81
 Identities = 187/649 (28%), Positives = 342/649 (52%), Gaps = 29/649 (4%)

Query: 1   MITFSEIQLLRGGKPLLEQASATIHPGDKVGLVGKNGCGKSTLFALLKDELTIDAGSFSK 60
           ++   ++++  GG  LL +   TI PG++V L+G+NG GKSTL  ++  E+  D G    
Sbjct: 3   LVALQQVEVSYGGPALLNKVDFTIEPGERVCLIGRNGVGKSTLLKVINREIVPDDGDIRF 62

Query: 61  PAHWELAWVAQETPA-LDRTALEYVIDGDREYRELERQLMD-AEAADNGT--KVADLHGK 116
               ++A + QE P+    +  + V +G  E   L R+     ++AD  +  K+A +  K
Sbjct: 63  NQGIKIAKLTQEVPSGTSGSVFDVVAEGLGEAGALIREFHHLTQSADEASMQKLARVQEK 122

Query: 117 IEMVGGYSIRARASELLDGLGFTQEQMSWSLTQFSGGWRMRLNLAQALICRSDLLLLDEP 176
           IE + G+++  +   +++ L    ++   +  + SGG + R+ LA+AL+ + D+LLLDEP
Sbjct: 123 IEEIDGWAMDQKVETVINRLSLDADK---AFDELSGGMKRRVLLAKALVEQPDILLLDEP 179

Query: 177 TNHLDLDAVMWLERWLQSYPGTLILISHDRDFLDPIVNRIVHIENQTLNEYTGNYSSFET 236
           TNHLD++++ WLE +L++Y G+L+ I+HDR FL  +  RIV ++   L  + G+Y ++  
Sbjct: 180 TNHLDVESIEWLENFLKAYEGSLLFITHDRRFLRNLATRIVEVDRGRLTSWPGDYDNYLR 239

Query: 237 QRAQKMLQQQAIYQKQQKQMAHMQSYIDRFRYKASKARQAQSRIKALE--RMEKVLPAQF 294
           ++A+++  ++   Q   K++A  + +I R   KA + R  + R++ LE  R E+      
Sbjct: 240 RKAEQLAAEEKQNQDFDKKLAQEEVWI-RQGIKARRTRN-EGRVRRLEAARKERAERRNL 297

Query: 295 DNPFSFEFREPAALPNPILMMDQVAAGYGDHLILEKIRLNLVPGSRIGLLGRNGAGKSTL 354
                 + ++       ++    +  G+    +++     ++ G RIG++G NG GK+TL
Sbjct: 298 IGNVKMQAQDVELSGKKVIEAKNIHHGFEGRTLVDDFSTLIMRGDRIGIIGPNGVGKTTL 357

Query: 355 IKLLSGELKPQSGDCTYSQGVKIGYFAQHQLETLHPEETPLQHMM----QIAPDKNELEL 410
           I +L GELKP SG+      ++I YF QH+ + L  +++ + ++      +  +     +
Sbjct: 358 INILLGELKPDSGEVKLGTKLEIAYFDQHRAQ-LDEKQSAMDNVSGGKDMMTINGQPRHV 416

Query: 411 RNYLGSFGFHGEKALEKVAPFSGGEKARLVLALIVWQKPNLLLLDEPTNHLDLDMRQALT 470
            +Y+  F F  E+A   +   SGGE+ RL+LA I+ +  NLL+LDEPTN LD++  + L 
Sbjct: 417 ISYMQDFLFTPERARAPITALSGGERNRLLLAKILAKPSNLLILDEPTNDLDIETLELLE 476

Query: 471 LALQSYEGAMVIVSHDR-YLLRATTDDLYLVHDHQVGPFDGDLNDYYKWLTDQQKAERK- 528
             L +Y G +++VSHDR +L    T  +    +  V  + G  +D   WL  + ++E++ 
Sbjct: 477 EMLDNYPGTLMLVSHDRDFLNNVVTSTIAFEGNGIVKEYVGGYDD---WLRQKPESEKQT 533

Query: 529 ETQPTNTANSANSAAAKKEQKRREADFRKLTAPIRKKLTQLEEKLDKLNHVVSEMEAQLS 588
            T         +S +  K   + +   +KL+   + +L +L E+L +L   +  + AQ+S
Sbjct: 534 NTNKLAQEKQKDSDSVTKVSSKNQKKTKKLSYKDQLELDKLPERLAELEQKIEAIHAQMS 593

Query: 589 DTSLYEAQNKATLTEVLAKQAAAKSELEQVELEWMAEQETLEEMERKFN 637
           +   Y+   +        K A  K +LEQ+E E   + E  E +E   N
Sbjct: 594 EPEFYQQDGE--------KIAQTKQQLEQLEAELEHKFERWEALEEMKN 634