Pairwise Alignments

Query, 211 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 47.4 bits (111), Expect = 2e-10
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 13/158 (8%)

Query: 56  CQIVEDIVAR----ATRISLPSYEFLYGDMLAWGVCVDQDVELGLYYMENAAHQGLPAAL 111
           C + E   AR    A +  L   ++ Y ++LA G  V +D +  L +   AA QG   ++
Sbjct: 92  CAVDEVAAAREYRMAAKAGLDWGQYNYANLLATGRGVAEDQQQALAFYRQAAEQGHAKSM 151

Query: 112 EQLGRYYSRGTLVQQDKERAIPYLREAAAMGNLNARIQLAELLLRDYGSPLDYEDAYRWL 171
             +GRY   G    +D + A+ + R +A  G+   +   A  +L D G     E A  WL
Sbjct: 152 NLVGRYLEEGLFCPRDLDAAVDWYRRSAEAGDFRGQFSYA-AVLADSG---QIEAALAWL 207

Query: 172 YNSVTAD-----QRTHNRIALLRQGLERRMPENIIARA 204
             ++        +  H  +A       R M E    RA
Sbjct: 208 RKALAGGNLKFLRTAHKALAAANDPQIRAMAEAYKERA 245



 Score = 28.1 bits (61), Expect = 1e-04
 Identities = 20/68 (29%), Positives = 31/68 (45%)

Query: 102 AAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLREAAAMGNLNARIQLAELLLRDYGSP 161
           AA +G+  A   LG+    G  + +D+  A+ + R AA  G+L AR          +G  
Sbjct: 34  AAKEGVVDAQALLGQILLEGRGIARDEALALRWFRIAAQSGHLMARNMAGRCQEHGWGCA 93

Query: 162 LDYEDAYR 169
           +D   A R
Sbjct: 94  VDEVAAAR 101