Pairwise Alignments

Query, 211 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., conserved outer membrane protein (NCBI) from Escherichia coli BW25113

 Score = 45.4 bits (106), Expect = 7e-10
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 97  YYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLREAAAMGNLNARIQLAELLLR 156
           Y+ E +A Q  P A  +LG  Y +G  V+ D  +AI + +EAA  G  +A+  L  +   
Sbjct: 89  YWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRN 148

Query: 157 DYGSPLDYEDAYRWLYNSVTADQRTHNRIALL 188
             G  +++ ++ +WL   +TA Q   N   LL
Sbjct: 149 GSGINVNHYESQKWL--KLTAKQHYKNAERLL 178



 Score = 22.7 bits (47), Expect = 0.005
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 138 AAAMGNLNARIQLAELLLRDY-GSPLDYEDAYRWLYNS 174
           +A  G+  ++ +L E  L    G PLDY  A  W   S
Sbjct: 57  SAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQS 94