Pairwise Alignments

Query, 211 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 45.8 bits (107), Expect = 9e-10
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 82  LAW----GVCVDQDVELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLRE 137
           +AW    G  VDQD +  +Y+   AA QG   A   +G  Y  G  V++D + A  +  +
Sbjct: 210 IAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTK 269

Query: 138 AAAMGNLNARIQLAELLLRDYGSPLDYE---DAYRWLYNSVTAD 178
           AA   +  A   LA +     G P+D     D YR + +S T D
Sbjct: 270 AAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRD 313



 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 27/102 (26%), Positives = 48/102 (47%)

Query: 80  DMLAWGVCVDQDVELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLREAA 139
           D+   G  V Q+  L  ++   +A QG   A  Q+   Y+ G  V QD ++A+ +  +AA
Sbjct: 176 DLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAA 235

Query: 140 AMGNLNARIQLAELLLRDYGSPLDYEDAYRWLYNSVTADQRT 181
           A G++ A + +  +     G   DY+ A+ W   +   +  T
Sbjct: 236 AQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDAT 277



 Score = 40.4 bits (93), Expect = 4e-08
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 4/113 (3%)

Query: 59  VEDIVARATRISLPSYEFLYGDMLAWGVCVDQ-DVELGLYYMENAAHQGLPAALEQLGRY 117
           +++I+ RA +    + +++ G        +D  D E   Y+++ AA QG   A   LG+ 
Sbjct: 13  IDEIIERAEKGDCEA-QYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQK 71

Query: 118 YSRGTLVQQDKERAIPYLREAAAMGNLNARIQLAELLLRDYGSPLDYEDAYRW 170
           Y+      +D E+AI +L++AA  G+  A   L   L  D G   +Y++A  W
Sbjct: 72  YTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTL--DRGEAPNYKEAVVW 122



 Score = 38.9 bits (89), Expect = 1e-07
 Identities = 29/92 (31%), Positives = 41/92 (44%)

Query: 79  GDMLAWGVCVDQDVELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLREA 138
           G M   G  V +D  L  ++ + AA QG   A   L   Y  G  V Q+K  A  +  ++
Sbjct: 139 GWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKS 198

Query: 139 AAMGNLNARIQLAELLLRDYGSPLDYEDAYRW 170
           A  GN +A+ Q+A       G   DY+ A  W
Sbjct: 199 AQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYW 230