Pairwise Alignments

Query, 622 a.a., DUF3413 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., Inner membrane protein YejM from Alteromonas macleodii MIT1002

 Score = 76.3 bits (186), Expect = 3e-18
 Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 26/329 (7%)

Query: 18  IKKNIEWLFSH-FILNAVLLAVLGLPYLQWMEVSSSNRVAYAYLSATQFGWFGL---FAF 73
           + K + W   H F L  +++A++      +        V   YL A  FG  G    F F
Sbjct: 12  VTKLVNW--GHWFALANIIIAIVIASIFVFSSPMPGTGVGTLYLLANWFGHIGFMTFFGF 69

Query: 74  AITLVSLALVWLPSRLLHGVVFVASWAVSILLMVDIEVYQQYRFHLSGFVWDLLLHGGQQ 133
            I ++ L  +    R++     + +     LL  D  ++ +  FH+S    DLL    Q 
Sbjct: 70  VIFILPLCYLVNNPRVIKVSASIIAAVGLALLAFDALLFNRTGFHISFHAADLLRSEAQS 129

Query: 134 VISV-SWYTLAMAGFIVFVV--GFAQWLIMKLAQRIQ----HSRGVRWVSAVWLLSLLSS 186
            +++ SW   A   F++F+V  GF   L   + +R++    H  G+  V+  ++   ++S
Sbjct: 130 TMAIESWQQWAFL-FLLFIVWLGFQLVLANAIWKRVERFTRHKVGIP-VTTFFVSCFVTS 187

Query: 187 QFIHAWKDATYDSEIPSYSYHWPLYYPLTAKRFFDQLGVVD-AQSARRQQVDFHAPTSST 245
             IH W DA     I      +PL YP TAK    + G++D A    R+Q+ F+ P    
Sbjct: 188 HAIHVWADAKLYQPIIKQDNMFPLSYPATAKTTMSRYGLLDLAAYEERKQLQFN-PDIHN 246

Query: 246 LNYPLRPLHIEPPAERPNILLIGIDAWRFDDANRDVTPNIAHFGQQATRFTHHLSGGNST 305
           + YP  P++      R   +++  D  +  D +     NI        +  ++ S  +S 
Sbjct: 247 ITYPAEPVYCSIETNRNLTVVVQTDNEQVVDLS-----NIKR--NTLNKVANYYSTASSI 299

Query: 306 QAGLFSLFYGLPATYWEEFQTSQTRPLLM 334
           +  + +  +G+P  Y +    SQ RP+L+
Sbjct: 300 EGLMTTTLFGVPEIYQDAL--SQKRPVLL 326



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 3/91 (3%)

Query: 530 DIAPMLMQEVLGVQNPLNEFALGYPLWQESPQREWTIIGSYFNYALVSDKEMLVSYPTGR 589
           D+AP ++   LG   P   ++ G  L   SP R W +  S     +  D +       G 
Sbjct: 417 DLAPTILG-ALGCNAPATFYSTGQSLL--SPSRPWLVSTSGERIVVFHDNKRTDVLSNGS 473

Query: 590 VETLNSELAPEKERQISTQQIMQALEEMRQF 620
            E  +       +  ++   + QA++ + +F
Sbjct: 474 YEISDMATGKRSKEALNVDLLSQAIKHLSRF 504