Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 856 a.a., ribonuclease R from Rhodanobacter sp000427505 FW510-R12

 Score =  697 bits (1800), Expect = 0.0
 Identities = 380/818 (46%), Positives = 500/818 (61%), Gaps = 25/818 (3%)

Query: 8   DPFADREADNYDNPIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAME 67
           DP ADREA  Y  PIPSRE IL  L Q    +    + EAL +  E   E LR+RL AM 
Sbjct: 3   DPHADREARRYARPIPSREAILALLEQRGELLTEARIAEALDIHDETDLEALRKRLAAMV 62

Query: 68  RDGQLVFTRRQCYALPEKLEMVKGYVIGHKDGHGWVRPEGSLNKEG--DILLPHHQMRTL 125
           RDGQL+  RR  YA  +KL+++ G V+ + +G+G++RP+     EG  D+ L   QMR +
Sbjct: 63  RDGQLLLGRRGGYAPTQKLDLIAGVVLANAEGYGFLRPD-----EGGDDLYLSPQQMRAV 117

Query: 126 IHGDFVLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILI 185
           +HGD VL    G D+RGR++G +  +L+ R+ ++VGR   + G + V PDD R++ D++I
Sbjct: 118 MHGDRVLASVVGIDRRGRRQGAIAEVLQRRSPRLVGRVVIDNGVTLVTPDDRRLNQDVMI 177

Query: 186 PNDLRAGARMGNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWP 245
                 GAR G +VV EITD  T  RG +G++  VLGE + P +  ++AI +H +PHEWP
Sbjct: 178 KPGRELGARSGQIVVAEITDPPTLQRGPIGEIRTVLGERLQPSLVVEMAIASHDLPHEWP 237

Query: 246 AEVEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKGGGWRLWVA 305
           AEV +  A +   V    ++GR DLR LPLVTIDG DARDFDDAVY E ++GGGWRL VA
Sbjct: 238 AEVLRDAAQVEPAVTAAEREGRTDLRQLPLVTIDGADARDFDDAVYAEPRRGGGWRLIVA 297

Query: 306 IADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMT 365
           IADVS+YV+   ALDKEA  R  S YFP  VVPMLPE LSNG+CSLNP V+RLCMVCEM 
Sbjct: 298 IADVSHYVQVGNALDKEAFERSTSTYFPGFVVPMLPETLSNGICSLNPSVERLCMVCEML 357

Query: 366 VSETGKLSGYKHYEAVMNSHARLTYTKVHEILE-GDEELRERYKALVPHLEELHKMYQVL 424
           V   G ++  K Y+AVM SHARLTY KV + +   + + R     ++P LE LH +Y+ +
Sbjct: 358 VDTEGNVTKSKFYDAVMLSHARLTYDKVWQAVGLREPDARHEVADVLPQLEHLHALYKAM 417

Query: 425 KSARDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKA 484
              R  RGAI+FET E KF  +    +ES+    RNDAHKLIEECMI AN+ +A  +EK 
Sbjct: 418 AGQRKRRGAIDFETPEVKFRLDQTGGVESMGATERNDAHKLIEECMIAANVQAALFLEKK 477

Query: 485 KEAALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQT 544
           K  AL+R HEPP  E+    + FL E  L +    E +P D+A ++  + ERP++ELIQ+
Sbjct: 478 KIPALFRAHEPPPAEKYEDLQQFLREFKLRMPPVDEVTPADFAEILALVQERPERELIQS 537

Query: 545 MLLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEGRNQDRW 604
           +LLR+   A Y  DN GHFGLAL+ YAHFTSPIRRYPDLL+HRAI+Y  A   G+  D  
Sbjct: 538 VLLRAQSMAAYQPDNRGHFGLALQAYAHFTSPIRRYPDLLVHRAIRY--ALSGGKPSD-- 593

Query: 605 TPTGGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGEELEGVVANVTS 664
                Y Y+  +M      CS  ERRA++A R+V +  KC +M+ H+G E +GVV  VTS
Sbjct: 594 -----YTYTSAEMAAMAIHCSQRERRAEEAERDVDERFKCAWMEKHIGSEFDGVVTGVTS 648

Query: 665 FGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVNLD 724
           FG FV L E  + GLVHIS L NDYYH+D   + L GE  GA +RLGD V++KVL  +L+
Sbjct: 649 FGLFVELDESKVSGLVHISQLMNDYYHFDATRKLLKGERTGAQFRLGDHVRIKVLRASLE 708

Query: 725 DRQIDFELVE---TSRKLRGQGKTAKKRADEARAKAQGKKEAATK-----GACGKSPTKS 776
           DR+IDF LV     +    G GK     A   R     K  A  K     G   K+  ++
Sbjct: 709 DRKIDFRLVSPRTPAAPPAGSGKAYDYAAAGERYSLPKKAAATAKAPGMFGRAAKAIGRA 768

Query: 777 ELKPQVEATRRPDSEGRSKPKKTKAPKKRKDQARKKSG 814
             + +VE    P    R        P +     R+++G
Sbjct: 769 FGRKEVEVAAPPAPAPRKAAMSDHPPPRAAAATRQQAG 806