Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 760 a.a., ribonuclease R from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  356 bits (913), Expect = e-102
 Identities = 220/699 (31%), Positives = 366/699 (52%), Gaps = 44/699 (6%)

Query: 52  GEEQYEGLRRRLRAMERDGQLVFTRRQCYALPEKLEMVKGYVIGHKDGHGWVRPEGSLNK 111
           G EQ + L   ++A+ R+ +L+      Y +  K++++ G V      + ++  E    +
Sbjct: 93  GREQVQNL---VKALVRENKLLPVDDDKYMMNLKVDIITGRVDLANSKYAYIVSE---ER 146

Query: 112 EGDILLPHHQMRTLIHGDFVLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSY 171
           E D+ +    ++  + GD V V+   + + GR+EG +V +L+    ++VG       + +
Sbjct: 147 EEDVRVHTEHLQYAMDGDLVKVEVLPSVRGGRQEGVVVEVLQRSRSEMVGLMELSKNFGF 206

Query: 172 VVPDDSRIHHDILIPNDLRAGARMGNVVVIEITDRGTR-NRGMMGKVVEVLGENMAPGME 230
           VVPD  R + D+ +       A+ G+ V++ I +   +  +   G+V+ V G       E
Sbjct: 207 VVPDFKRTYFDVFVGERHLNDAQSGDKVLVRIIEWPDKPGKNPTGEVIRVFGPAGEHEAE 266

Query: 231 TQIAIRTHQIPHEWPAEVEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAV 290
               +    +P E+P  VE++   +++++P      R D R +   TID  DA+DFDDA+
Sbjct: 267 IHSIMAEFGLPFEFPESVEEEAESISDKIPAGEIAKRRDFRDVTTFTIDPADAKDFDDAL 326

Query: 291 YCEAKKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCS 350
             +  + G W + V IADV++YV P + L+KEA +R  SVY   + +PMLPE LSNGLCS
Sbjct: 327 SIQKLENGNWEIGVHIADVTHYVTPRSILEKEAFHRATSVYLVDRTIPMLPERLSNGLCS 386

Query: 351 LNPQVDRLCMVCEMTVSETGKLSGYKHYEAVMNSHARLTYTKVHEILE-GDEELRERYKA 409
           L P  ++L       + E GKL    +   ++ S  R  Y +  E +E G+ +  E    
Sbjct: 387 LRPNEEKLTFSVVFELDENGKLYDTWYGRTIIYSDRRFAYEEAQERIETGEGDFAE---- 442

Query: 410 LVPHLEELHKMYQVLKSARDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEEC 469
               +  L+ + + L++ R + GAI FETVE KF  +   K  S+    R DAHKLIEE 
Sbjct: 443 ---EINLLNNIAKKLQAKRFKNGAISFETVEVKFKLDENGKPLSVYVKERKDAHKLIEEY 499

Query: 470 MILANIASASLV-----EKAKEAALYRVHEPPGEERLTGFRDFLGELG--LDLSGGLEPS 522
           M+LAN   A  V      K +   +YR H  P  +RL+ F  F  + G  +D  G +   
Sbjct: 500 MLLANKKVAEFVYNLSKGKKRPTMVYRTHGSPDPDRLSTFALFARKFGYKVDPEGDIS-- 557

Query: 523 PTDYANLMKQIGERPDKELIQTMLLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPD 582
             +  +L K+I  +P++ ++Q + +R+M +A Y+ +  GHFGLA   Y+HFTSPIRRYPD
Sbjct: 558 -EELNHLTKEIEGKPEQSVLQNLAIRTMAKAKYSTEPEGHFGLAFAHYSHFTSPIRRYPD 616

Query: 583 LLLHRAIKYLIAKQEGRNQDRWTPTGGYHYSFDDMDFYGEQC---SMTERRADDATREVS 639
           ++ HR +++ +   +  +Q+                 Y E+C   S  E+RA DA R   
Sbjct: 617 MMAHRLLQHYLDGGKSADQEE----------------YEERCRHSSEMEKRAADAERASI 660

Query: 640 DWLKCEYMQDHVGEELEGVVANVTSFGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRL 699
            + + E+M+D +G + +G+V+ VT +G FV + E   +G+V ++ + +DYY  D    R+
Sbjct: 661 KYKQVEFMKDTIGNQYKGIVSGVTEWGIFVEIEENKCEGMVRLADINDDYYELDADNYRI 720

Query: 700 VGESFGAIYRLGDAVKVKVLAVNLDDRQIDFELVETSRK 738
           +G     I   GD V V+V + N+ DR ID +L+ET ++
Sbjct: 721 IGRQTKRIISFGDEVLVEVKSANMADRTIDLDLIETLKQ 759