Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 742 a.a., ribonuclease R from Magnetospirillum magneticum AMB-1

 Score =  405 bits (1041), Expect = e-117
 Identities = 268/717 (37%), Positives = 381/717 (53%), Gaps = 35/717 (4%)

Query: 21  PIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAMERDGQLVFTRRQCY 80
           PIPS++ IL+F+      + + +L  A  L G ++ + L+  L+ +ER+G +   +++ +
Sbjct: 8   PIPSKQEILDFIRSQPGRVGKRELARAFNLRGSDKID-LKAILKELEREGVVERGQKRRF 66

Query: 81  ALPEKLEMVKGY-VIG-HKDGHGWVRPEGSLNKEGD------ILLPHHQMRTLIH-GDFV 131
           A P  L  V    +IG   DG    RP   LN EG+       + P       +  GD V
Sbjct: 67  ASPGTLPDVGVVEIIGTDSDGELLARP---LNYEGEGRPPRIFMAPFRAGEAAVGVGDRV 123

Query: 132 LVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEY-GYSYVVPDDSRIHHDILIPNDLR 190
           L +          E R +RI+ E   +++G F     G   + P   +   + ++P    
Sbjct: 124 LAKLKRVRGEDVYEARAIRIIGEARARVLGVFEPNPDGSGRLRPTSRKEKAEYMVPRGET 183

Query: 191 AGARMGNVVVIEITDRGTRNRGMM-GKVVEVLGENMAPGMETQIAIRTHQIPHEWPAEVE 249
             A+ G +V+ +I     R  GM    V E +G   AP   + +AI T+ +P E+P    
Sbjct: 184 GDAKAGELVLADIMPG--RLYGMRTASVKERMGLLGAPRSVSLVAIHTNDVPFEFPEAAL 241

Query: 250 QQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEA----KKGGGWRLWVA 305
           QQ A    E P    + R DLR++PLVTIDGEDARDFDDAV+ E     K  GGW   VA
Sbjct: 242 QQAAA---EGPAPMNE-RTDLRSIPLVTIDGEDARDFDDAVFAEPDPDPKNPGGWHCMVA 297

Query: 306 IADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMT 365
           IADVS+YVRP  +LDKEA  RGNSVYFP +VVPMLPE LSNG CSL P  DR CM     
Sbjct: 298 IADVSWYVRPGDSLDKEAFKRGNSVYFPDRVVPMLPEELSNGWCSLKPDEDRPCMAVHFW 357

Query: 366 VSETGKLSGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHLEELHKMYQVLK 425
           +   G    ++    +M S ARLTYT+V    +G  + R     L P +E L+  +  L 
Sbjct: 358 LDALGNKLHHRFVRGMMRSVARLTYTQVQAAKDGTPDDRTG-PLLAPVIEPLYGAWAALF 416

Query: 426 SARDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKAK 485
             R ERG +E +  E K     + K+E+I    R D+H+LIE+ MI+AN+ +A  +EK  
Sbjct: 417 RERKERGVLELDIPERKVTITPEGKVEAITERERFDSHRLIEDFMIMANVCAAETLEKVH 476

Query: 486 EAALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQTM 545
           +  +YR+H+ P +E+L G R+FL  + L L+ G    P  +  +++ +    +  L+  +
Sbjct: 477 KPCMYRIHDLPSQEKLDGLREFLSSMDLKLAKGQVLRPAHFNRILEAVEGTANSHLVSEV 536

Query: 546 LLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEGRNQDRWT 605
           +LRS  QA Y+ +N GHFGL L RYAHFTSPIRRY DLL+HRA+   +   EG       
Sbjct: 537 ILRSQAQAQYSPENIGHFGLGLARYAHFTSPIRRYADLLVHRALISGLHLGEG------- 589

Query: 606 PTGGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGEELEGVVANVTSF 665
             G    +  +   +GE  S+TERRA  A RE  D     ++ D VG    G V+ VT F
Sbjct: 590 --GLPADAVAEFAEWGEHISVTERRAATAEREAVDRYVTAFLADKVGATFAGKVSGVTRF 647

Query: 666 GFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVN 722
           G FV L +   DGLV ISTL  D+Y +D +   LVG+     ++LG  + V++   N
Sbjct: 648 GLFVTLDQTGADGLVPISTLPEDFYVHDEVHHCLVGKRTRKTFQLGQKLDVELAEAN 704