Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 818 a.a., ribonuclease R from Erwinia tracheiphila SCR3

 Score = 1018 bits (2631), Expect = 0.0
 Identities = 509/812 (62%), Positives = 611/812 (75%), Gaps = 11/812 (1%)

Query: 8   DPFADREADNYDNPIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAME 67
           DPF +REA+ Y+NPIPSRE+IL  L +   P +R +L  AL + GEEQ E LRRRLRAME
Sbjct: 4   DPFQEREAEKYENPIPSREFILAHLDKREKPASREELAVALSISGEEQTEALRRRLRAME 63

Query: 68  RDGQLVFTRRQCYALPEKLEMVKGYVIGHKDGHGWVRPEGSLNKEGDILLPHHQMRTLIH 127
           RDGQLVFTRRQCYALPE+L++++G VIGH+DG G++R EGS   + D+ L   QM+  +H
Sbjct: 64  RDGQLVFTRRQCYALPERLDLLRGKVIGHRDGFGFLRVEGS---KDDLYLAAEQMKMCMH 120

Query: 128 GDFVLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIPN 187
           GD +L Q +G D++GR+E R+VR+LE RN QIVGR+F E G  +VVPDDSR+  DILIP 
Sbjct: 121 GDVILAQSTGADRKGRREARVVRVLEPRNNQIVGRYFTEAGVGFVVPDDSRLSFDILIPQ 180

Query: 188 DLRAGARMGNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWPAE 247
           +   GARMG VVV+E+T R TR    +G+VVEVLG+NM  GM  ++A+RTH IPH WP  
Sbjct: 181 EALNGARMGFVVVVELTQRPTRRSKAVGQVVEVLGDNMGTGMAVEMALRTHDIPHVWPEA 240

Query: 248 VEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKGGGWRLWVAIA 307
           ++ Q+A L EEVPE+AK GRVDLR LPLVTIDGEDARDFDDAV+CE K+ GGWRLWVAIA
Sbjct: 241 LQNQIATLKEEVPEKAKAGRVDLRDLPLVTIDGEDARDFDDAVFCERKRSGGWRLWVAIA 300

Query: 308 DVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVS 367
           DVSYYVRP T LD EA+NRG SVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMT+S
Sbjct: 301 DVSYYVRPGTPLDDEAVNRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTIS 360

Query: 368 ETGKLSGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHLEELHKMYQVLKSA 427
            TGKL GYKHYEAVMNS ARLTY KV  IL GD+ LR++Y+  V  LEELH+MY VL+ A
Sbjct: 361 ATGKLIGYKHYEAVMNSWARLTYNKVWSILLGDQPLRKQYQPFVKDLEELHRMYLVLEKA 420

Query: 428 RDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKAKEA 487
           R++RG I FET E KFIFNA+R+IE +E V RNDAHKLIEECMILANIASA  VEK +E 
Sbjct: 421 REQRGGISFETDEAKFIFNAERRIERVEQVSRNDAHKLIEECMILANIASARYVEKNQEP 480

Query: 488 ALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQTMLL 547
           AL+R H+ P EE +  FR  L ELGL L GGL+P P DYA L+ QI  RPD E++QTMLL
Sbjct: 481 ALFRDHDRPSEENIKSFRSVLNELGLTLGGGLKPHPLDYAALLMQIASRPDAEMLQTMLL 540

Query: 548 RSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEGRNQDRWTPT 607
           RSMKQAVY+ +N GHFGLAL  YAHFTSPIRRYPDLLLHRAIKYL+AK+ G  +   TPT
Sbjct: 541 RSMKQAVYDPENRGHFGLALSSYAHFTSPIRRYPDLLLHRAIKYLLAKENGTLEGNTTPT 600

Query: 608 GGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGEELEGVVANVTSFGF 667
           GG+HY    M  +G+ CSMTERRAD+A R+V+DWLKC++MQD VGE   GV+++VT FGF
Sbjct: 601 GGFHYDLQQMLQFGQHCSMTERRADEAARDVADWLKCDFMQDQVGETFTGVISSVTGFGF 660

Query: 668 FVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVNLDDRQ 727
           FVRLT+L IDGLVH+STL NDYY +D IGQRL+GES G  YRLGD V V+V AV++D+R+
Sbjct: 661 FVRLTDLFIDGLVHVSTLDNDYYRFDAIGQRLIGESGGKTYRLGDMVNVRVDAVHMDERK 720

Query: 728 IDFELVETSRKLRGQGKTAKKRADEARAKAQGKKEAATKGACGKSPTKSELKPQVEATRR 787
           IDF L+ +SRK  G+ KT + R  +  A  QGK        C ++ +K        A R 
Sbjct: 721 IDFALISSSRKPPGECKTDRDRVKKETASNQGK--------CSRNQSKKGNFEPDSAFRS 772

Query: 788 PDSEGRSKPKKTKAPKKRKDQARKKSGKVRDK 819
                 +   K K  KK  D+ RK +   R K
Sbjct: 773 DQDRQSASANKDKKVKKPSDKTRKIAAATRSK 804