Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 814 a.a., ribonuclease R from Enterobacter asburiae PDN3

 Score = 1010 bits (2612), Expect = 0.0
 Identities = 504/811 (62%), Positives = 617/811 (76%), Gaps = 19/811 (2%)

Query: 8   DPFADREADNYDNPIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAME 67
           DPF +REA+ Y NPIPSRE+I+E LT+   P NR +L   L +EGEEQ E LRRRLRAME
Sbjct: 4   DPFQEREAEKYANPIPSREFIIEHLTKREKPANREELAVELNIEGEEQIEALRRRLRAME 63

Query: 68  RDGQLVFTRRQCYALPEKLEMVKGYVIGHKDGHGWVRPEGSLNKEGDILLPHHQMRTLIH 127
           RDGQLVFTRRQCYALPE+L+++KG VIGH+DG G++R EG   ++ D+ L   QM+  IH
Sbjct: 64  RDGQLVFTRRQCYALPERLDLLKGTVIGHRDGFGFLRVEG---RKDDLYLSSEQMKMCIH 120

Query: 128 GDFVLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIPN 187
           GD +L QP G D++GR+E R+VR+L  +  QIVGR+F + G  +VVPDDSR+  DILIP 
Sbjct: 121 GDQILAQPLGADRKGRREARVVRVLVPKTSQIVGRYFTDAGVGFVVPDDSRLSFDILIPP 180

Query: 188 DLRAGARMGNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWPAE 247
           +   GARMG VVV+E+T R TR    +GK+VEVLG+NM   M   +A+RTH+IP+ WP  
Sbjct: 181 EEVMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTTMAVDMALRTHEIPYIWPKA 240

Query: 248 VEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKGGGWRLWVAIA 307
           VE+Q+  L EEVPEE+K GRVDLR+LPLVTIDGEDARDFDDAVYCE K+GGGWRLWVAIA
Sbjct: 241 VEEQIESLREEVPEESKVGRVDLRSLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA 300

Query: 308 DVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVS 367
           DVSYYVRP T LD EA +RG SVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMT+S
Sbjct: 301 DVSYYVRPHTPLDNEARSRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTIS 360

Query: 368 ETGKLSGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHLEELHKMYQVLKSA 427
             G+L+GYK YEAVM+SHARLTYTKV  +L+GD++LRE+Y  LV H+EELH +Y+ L  A
Sbjct: 361 TKGRLTGYKFYEAVMSSHARLTYTKVWHMLQGDQDLREQYAPLVKHIEELHNLYKTLDQA 420

Query: 428 RDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKAKEA 487
           R+ERG I FE+ E KFIFNA+R+IE IE   RNDAHKLIEECMILANI++A  VEKAKE 
Sbjct: 421 REERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEP 480

Query: 488 ALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQTMLL 547
           AL+R+H+ P  E +T FR  L ELGL+L GG +P P DYA L++ IG+RPD E++QTMLL
Sbjct: 481 ALFRIHDKPTTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESIGDRPDAEMLQTMLL 540

Query: 548 RSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEGRNQDRWTPT 607
           RSMKQA+Y+ +N GHFGLAL+ YAHFTSPIRRYPDL LHRAIKYL+A+++G ++   T T
Sbjct: 541 RSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAQEQG-HKGNTTET 599

Query: 608 GGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGEELEGVVANVTSFGF 667
           GGYHYS ++M   G+ CSM ERRAD+ATR+V+DWLKC++M D VG   +GV+A+VT FGF
Sbjct: 600 GGYHYSMEEMLQLGQHCSMAERRADEATRDVADWLKCDFMLDQVGNVFKGVIASVTGFGF 659

Query: 668 FVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVNLDDRQ 727
           FVRL EL IDGLVH+S+L NDYY +D +GQRL+GES G  YRLGD V+VKV AVN+DDR+
Sbjct: 660 FVRLDELFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTYRLGDRVEVKVEAVNMDDRK 719

Query: 728 IDFELVETSRKLRGQGKTAKKRADEARAKAQGKKEAATKGACGKSPTKSELKPQVEATRR 787
           IDF L+ + R  R  GKT ++R   A+    GK     +   GK           +    
Sbjct: 720 IDFSLISSERAPRNVGKTERER---AKKTGNGKPGGGKRRQAGK-----------KVNFE 765

Query: 788 PDSEGR-SKPKKTKAPKKRKDQARKKSGKVR 817
           PDS  R  K +K KA KK    A+K S K +
Sbjct: 766 PDSAFRGEKKQKPKAAKKEARSAKKPSAKTQ 796