Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 724 a.a., ribonuclease R from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  360 bits (923), Expect = e-103
 Identities = 224/729 (30%), Positives = 373/729 (51%), Gaps = 29/729 (3%)

Query: 14  EADNYDNPIPSREYILEFL-TQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAMERDGQL 72
           +AD  +N     E IL FL +      +   +   L +  +     +   L  +   G +
Sbjct: 14  KADKINNAAQLAERILHFLDSHYGEEYSLKQIIRKLNIRDKITKGSVEPVLHKLVAAGSV 73

Query: 73  VFTRRQCYALPEKLEMVKGYVIGHKDGHGWVRPEGSLNKEGDILLPHHQMRTLIHGDFVL 132
               R  ++  +  + ++G V        ++ P+     E DIL+    ++  +  D V 
Sbjct: 74  SKNPRNHFSSTKTPDFIEGTVDFVNPRFAFIVPDKKGEGEEDILVKARDLKNALDDDKVR 133

Query: 133 VQPSGTDKRGRK-EGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIPNDLRA 191
           V  +     G+K EGR++ +++    + VGR      +++VV D  ++HHDI I      
Sbjct: 134 VMVNPPKHAGQKREGRVLEVVKRAREEFVGRVEISPRFAFVVSDFKKMHHDIFIRKSDLN 193

Query: 192 GARMGNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWPAEVEQQ 251
           GA     VV++IT+    ++   GKV++VLGE     +E    +    +P E+P E+ Q+
Sbjct: 194 GAEHNQKVVVKITEWRDEDKNPTGKVLQVLGEAGEHEVEIHSIMAEFGLPFEYPDEIVQE 253

Query: 252 VAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKGGGWRLWVAIADVSY 311
              +++++ +   + R D R +   TID  DA+DFDDA+  +    G   + V IADV++
Sbjct: 254 AEAISDKISKSDIKSRKDFRGVTTFTIDPADAKDFDDAISYQRLPNGNIEMGVHIADVTH 313

Query: 312 YVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSETGK 371
           YV+P+T L+KEA +R  SVY   + +PMLPE LSNGLCSL P  D+L   C   + E G+
Sbjct: 314 YVKPNTPLEKEAYDRATSVYLVDRTIPMLPERLSNGLCSLRPHEDKLTFSCVFELDEDGQ 373

Query: 372 LSGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHLEELHKMYQVLKSARDER 431
           +  +     +++S  R  Y       E  E + ++       L  L+ + + ++  R ++
Sbjct: 374 VLKHWIGRTIIHSDRRFAYE------EAQENIDQQEGDFYSELTLLNNLAKKIRKRRFQQ 427

Query: 432 GAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLV---EKAKEAA 488
           GAI FETVE KF  + +     +    R D HK+IEE M+LAN A A  V    K  +  
Sbjct: 428 GAINFETVEVKFKLDDKGTPLGLMVKERKDIHKMIEEFMLLANKAVAEFVFNKNKGDDTF 487

Query: 489 LYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGE---RPDKELIQTM 545
           +YR+H+ P  ERL  F +F  + G ++S  +  +    A L K +GE   +P++ L++ +
Sbjct: 488 VYRIHDHPDLERLETFANFAKKFGHEVS--ITEATRVSATLNKLMGEIEGKPEQNLLEQL 545

Query: 546 LLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEGRNQDRWT 605
            +RSM +A Y  +  GHFGLA K Y HFTSPIRRYPD+++HR +++ +   +  +++ W 
Sbjct: 546 AIRSMAKARYTTEPKGHFGLAFKHYTHFTSPIRRYPDMMVHRLLQHYLDGGKSADKEAW- 604

Query: 606 PTGGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGEELEGVVANVTSF 665
                    +D   +    S  E+RA DA R    + + EYM     +  +G+++ VT +
Sbjct: 605 ---------EDKCIHS---SEREKRAADAERASIKYKQVEYMALAEDKAYDGIISGVTEW 652

Query: 666 GFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVNLDD 725
           G FV +TE   +G++ +  L +DYY +D    RL+G     +  LGD V+V+V+  ++D 
Sbjct: 653 GIFVEITETKCEGMIRLQDLEDDYYEFDEKNMRLIGAKNKKMITLGDQVRVRVVNTDIDR 712

Query: 726 RQIDFELVE 734
           R ID E  +
Sbjct: 713 RTIDLEFAD 721