Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 814 a.a., Ribonuclease R from Acinetobacter radioresistens SK82

 Score =  596 bits (1537), Expect = e-174
 Identities = 343/819 (41%), Positives = 489/819 (59%), Gaps = 32/819 (3%)

Query: 7   LDPFADREADNYDNPIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAM 66
           +DP A  EA+ YDNPIPSR  I + + Q   P +  DL E  +++ ++  + L  RL AM
Sbjct: 18  VDPEAKAEAERYDNPIPSRILIQKTIEQLQAPQSHADLVEHFEIQDQKSIDALNHRLIAM 77

Query: 67  ERDGQLVFTRRQCYALPEKLEMVKGYVIGHKDGHGWVRPEGSLNKEGDILLPHHQMRTLI 126
            RDGQLV    + + L   L   +  V  +  G G  + +G  N    + LP  ++R + 
Sbjct: 78  VRDGQLVKDGFK-FQLVADLPTYEATVYINTKGMGIAQIDGQDN----LYLPERELRLVF 132

Query: 127 HGDFVLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIP 186
           +GD V V+ + TD++G+  G +  +++ R  QI+G+     G  ++ P     H  I + 
Sbjct: 133 NGDRVRVRQTSTDRKGKAWGFITEVIQRRVKQIIGQLKMYEGEYFIQPSMPNQHQPITLE 192

Query: 187 NDL--RAGARMGNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEW 244
            +L   A   +G++V + I D  TR     G +V+ + +     +     I  + +P+E+
Sbjct: 193 KELIDHAKINLGDMVRVAIDDYPTREEFSTGHIVQSMADKADTEIIIPQTILEYGLPYEF 252

Query: 245 PAEVEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKGGGWRLWV 304
           P EV ++ A   +E  E+ +QGRVDLR L LVTIDGEDARDFDDAVY E + GGG+R+ V
Sbjct: 253 PEEVLKEAASF-KEPDEQDRQGRVDLRDLALVTIDGEDARDFDDAVYAEKRPGGGYRVVV 311

Query: 305 AIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEM 364
           AIADVS+YVR  TAL++EA  RG SVYFP  V+PMLPE LSNGLCSLNP +DRLCMVC++
Sbjct: 312 AIADVSHYVRLGTALNEEAEERGTSVYFPHFVLPMLPEALSNGLCSLNPHLDRLCMVCDL 371

Query: 365 TVSETGKLSGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHLEELHKMYQVL 424
            VS  G+++ Y+ Y AVM+S ARLTYT+V   L+GD +     + +   L  L ++YQVL
Sbjct: 372 NVSRAGRVTQYEFYPAVMHSKARLTYTQVAAYLDGDSQAVPEDRTVRKSLNTLFQLYQVL 431

Query: 425 KSARDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKA 484
           K  R +R A+EFETVET   F+    I+ I P  RN+AHKLIEECM+LAN+A+A    K 
Sbjct: 432 KELRAKRHAMEFETVETYMTFDELGGIKEILPRSRNEAHKLIEECMLLANVAAAEYSLKN 491

Query: 485 KEAALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQT 544
           +   LYRVH+ P   R    RD++  LGL+     +P+  DY  +++   +R D   I  
Sbjct: 492 EIPMLYRVHDAPEFSRTQKVRDYVKLLGLNFPE--QPTQADYQAVIEATKDRIDAPSIHA 549

Query: 545 MLLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIK-YLIAKQEGRNQDR 603
           +LLRSM QA Y  +N GH+GLA + Y HFTSPIRRYPDLLLHRAIK +L  KQ       
Sbjct: 550 VLLRSMMQAYYGPENIGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLKHKQ------- 602

Query: 604 WTPTGGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGEELEGVVANVT 663
                 +  S + +   GE  S TERRAD+A+R V+ WLKC YMQ H+GEE +G+++ VT
Sbjct: 603 ------FALSGNQLAEAGEHYSQTERRADEASRSVTMWLKCHYMQQHLGEEFDGIISAVT 656

Query: 664 SFGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVNL 723
            FG FV L +L++DG++H+S L +D++ YD   Q L+G+S G ++ LGD V++KV  V L
Sbjct: 657 EFGLFVTLKDLYVDGMLHVSQLGDDFFVYDQPSQSLIGQSRGQVFGLGDEVRIKVAGVQL 716

Query: 724 DDRQIDFELVETSRKLRGQGKTAKKRADEARAKAQGKKEAATKGACGKSPTKSELKPQVE 783
           ++R+IDFELV   R+L   G+  + RA       +    A  K   G+ P + +     +
Sbjct: 717 EERKIDFELV---RQLTHAGRAVRSRAPRVAQVREENHGARNKDDSGEQPVRKKRNKSSK 773

Query: 784 ATRRPDSEGRSKPKKT----KAPKKR-KDQARKKSGKVR 817
            +      G+   +K     +APKK+ KD+ R+ + K R
Sbjct: 774 PSSYTKKSGKKSAEKASVSKEAPKKKSKDKKRRSNAKSR 812