Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score =  272 bits (696), Expect = 4e-78
 Identities = 146/246 (59%), Positives = 179/246 (72%), Gaps = 2/246 (0%)

Query: 1   MSNELIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALD 60
           MS E IYG+HAV A+L+  P R  + ++ +GR + R+  ++    +  V+I +  R+ +D
Sbjct: 1   MSLEKIYGVHAVEALLRHHPKRVKQVWLAEGRSEPRVQALVELATQNKVAIGQAERREMD 60

Query: 61  DKAEGANHQGLIARVKPARQLNENDLDDILAQHE-QPLLLVLDGVTDPHNLGACLRNADA 119
              EG  HQG++A V P++   E  LD++L + E  PLLLVLDGVTDPHNLGACLR+ADA
Sbjct: 61  VWVEGV-HQGVVADVSPSQVWGEAMLDELLDRTEGAPLLLVLDGVTDPHNLGACLRSADA 119

Query: 120 AGVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEA 179
           AG  AVIVPKDKSA LT  V KVACGAAE +PLV VTNLART+  LQ++G+W VGTAGEA
Sbjct: 120 AGALAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEA 179

Query: 180 THDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEA 239
              IY   LTG   ++MGAEG GMRRLTRE CD L+ +PMAGSVSSLNVSVA GVCLFEA
Sbjct: 180 EVSIYDQDLTGPTILIMGAEGKGMRRLTREHCDYLVHLPMAGSVSSLNVSVATGVCLFEA 239

Query: 240 VRQRMA 245
            RQR A
Sbjct: 240 QRQRGA 245