Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Pseudomonas putida KT2440

 Score =  281 bits (719), Expect = 9e-81
 Identities = 148/245 (60%), Positives = 179/245 (73%), Gaps = 2/245 (0%)

Query: 4   ELIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDKA 63
           E IYG+HAV A+LQ  P R  + ++ +GR + RL  +L       V + +  R+ +D   
Sbjct: 5   EKIYGVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREMDAWV 64

Query: 64  EGANHQGLIARVKPARQLNENDLDDILAQHEQP-LLLVLDGVTDPHNLGACLRNADAAGV 122
           EG  HQG++A V P++   E  L+++L + E P L+LVLDGVTDPHNLGACLR ADAAG 
Sbjct: 65  EGV-HQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADAAGA 123

Query: 123 AAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHD 182
            AVIVPKDKSA LT  V KVACGAAE +PLV VTNLART+  LQ++G+W VGTAGEA  +
Sbjct: 124 TAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEQE 183

Query: 183 IYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAVRQ 242
           IYQ  LTG L ++MGAEG GMRRLTRE CD L+K+PMAGSVSSLNVSVA GVCLFEAVRQ
Sbjct: 184 IYQQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFEAVRQ 243

Query: 243 RMANR 247
           R   R
Sbjct: 244 RQVKR 248