Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Magnetospirillum magneticum AMB-1

 Score =  165 bits (418), Expect = 8e-46
 Identities = 97/237 (40%), Positives = 134/237 (56%), Gaps = 9/237 (3%)

Query: 6   IYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDK-AE 64
           +YGIHAV A L     R         R+    +     L    V ++ M R  +D   A 
Sbjct: 37  LYGIHAVCAALANPDRR--------ARRLVATVEAAKSLPATKVPVETMERSEIDRLLAP 88

Query: 65  GANHQGLIARVKPARQLNENDLDDILAQHEQPLLLVLDGVTDPHNLGACLRNADAAGVAA 124
           G+ HQG+   V+P       D+  +       L+LVLD VTDPHN+GA LR+A A G  A
Sbjct: 89  GSVHQGVALLVEPLPATTIEDVIRMADGAPSALVLVLDQVTDPHNVGAILRSAAAFGALA 148

Query: 125 VIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHDIY 184
           V+ P   +   T T++K A GA E +PLVRVTN+ RT+  L++ G W  G A +A   + 
Sbjct: 149 VVAPDRHTPDETGTLAKSASGALERMPLVRVTNVVRTLEDLKKAGFWTAGLAADAPKTLA 208

Query: 185 QSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAVR 241
           ++ L+G + +V+GAEG+GMRRLTRE CD L+++PM G + SLNVS A  V L+E  R
Sbjct: 209 EANLSGKVVLVLGAEGEGMRRLTREHCDHLVRLPMCGEMESLNVSNAAAVALYEMRR 265