Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 82.8 bits (203), Expect = 8e-21
 Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 14/245 (5%)

Query: 6   IYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDD---- 61
           +YG +A  A+ Q  P   V A+ ++      + P   E +R  ++    +   +D+    
Sbjct: 110 VYGENACQALFQSRPDAIVRAWFIQS-----VTPRFKEALRW-MAANRKAYHVVDEAELA 163

Query: 62  KAEGANHQGLIARVKPARQLNENDLDDILAQH-EQPLLLVLDGVTDPHNLGACLRNADAA 120
           KA G  H G +  +   R  N   +   + Q  +Q  +L L+ V +PHNLG  +R+    
Sbjct: 164 KASGTEHHGGVCFLIKKR--NGTTVKQWVKQAADQDCVLALEDVANPHNLGGMMRSCAHF 221

Query: 121 GVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEAT 180
           GV  V+V +D +   +    + A G AE V  +   ++   +   ++ G   V T+ +  
Sbjct: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGESIVDVLDDFRQAGYTVVTTSSDRG 280

Query: 181 HDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAV 240
             ++ + L   + +V+G E D +    RE  D  +KI   G+V SLNVSVA GV L E  
Sbjct: 281 QALFSTTLPEKMVLVLGREYDYLPEAAREPDDLCVKINGTGNVESLNVSVATGVLLAEWW 340

Query: 241 RQRMA 245
           RQ  A
Sbjct: 341 RQNKA 345