Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., predicted methyltransferase (NCBI) from Escherichia coli BW25113

 Score = 85.1 bits (209), Expect = 2e-21
 Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 14/245 (5%)

Query: 6   IYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDD---- 61
           +YG +A  A+ Q  P   V A+ ++      + P   E +R  ++    +   +D+    
Sbjct: 110 VYGENACQALFQSRPEAIVRAWFIQS-----VTPRFKEALRW-MAANRKAYHVVDEAELT 163

Query: 62  KAEGANHQGLIARVKPARQLNENDLDDILAQH-EQPLLLVLDGVTDPHNLGACLRNADAA 120
           KA G  H G +  +   R  N   +   ++Q   Q  +L L+  ++PHNLG  +R+    
Sbjct: 164 KASGTEHHGGVCFLIKKR--NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221

Query: 121 GVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEAT 180
           GV  V+V +D +   +    + A G AE V  +   N+   +   ++ G   V T+ E  
Sbjct: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280

Query: 181 HDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAV 240
             ++++ L   + +V+G E +G+    R+  D  +KI   G+V+ LN+SVA GV L E  
Sbjct: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340

Query: 241 RQRMA 245
           RQ  A
Sbjct: 341 RQNKA 345