Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., 23S rRNA Gm-2251 2'-O-methyltransferase (EC 2.1.1.185) from Kangiella aquimarina DSM 16071

 Score =  266 bits (681), Expect = 2e-76
 Identities = 142/245 (57%), Positives = 172/245 (70%), Gaps = 4/245 (1%)

Query: 3   NELIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDK 62
           +EL+YG+HAV  +L+R   R    Y+   R D R   V+       + + +  R  LD+ 
Sbjct: 2   SELVYGLHAVEVLLKRSSERVERLYIQSNRHDQRSHKVVKLAQDKNIPVIQKDRDELDEM 61

Query: 63  AEGANHQGLIARVKPARQ--LNENDLDDILAQ-HEQPLLLVLDGVTDPHNLGACLRNADA 119
            +   HQG+IA  +P ++   +E  + ++L Q  E PL+L+LDGVTDPHNLGACLR+ADA
Sbjct: 62  TD-QRHQGVIAVCRPEKKKSFHEKHIPELLNQIDEAPLILILDGVTDPHNLGACLRSADA 120

Query: 120 AGVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEA 179
           AGV  VI PKD +A +T  V KVACGAAETVP + VTNL RTM+ LQE GVW  GTAGEA
Sbjct: 121 AGVHMVIAPKDNAASITDVVRKVACGAAETVPFIPVTNLVRTMKQLQEAGVWIAGTAGEA 180

Query: 180 THDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEA 239
             DIYQ+ L G LAIVMGAEG+GMRRLTRE CD LIKIPMAG VSSLNVSVA GV LFEA
Sbjct: 181 EQDIYQANLKGPLAIVMGAEGEGMRRLTRENCDYLIKIPMAGEVSSLNVSVATGVTLFEA 240

Query: 240 VRQRM 244
           VRQR+
Sbjct: 241 VRQRL 245