Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., rRNA methylases from Enterobacter asburiae PDN3

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 26/251 (10%)

Query: 6   IYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDD---- 61
           +YG +A  A+    P   V A+ ++      + P   E +R  ++    +   +DD    
Sbjct: 141 VYGENACQALFLSRPECIVRAWFIQS-----VTPRFKEALRW-MAANRKAYHVVDDAELT 194

Query: 62  KAEGANHQGLIARVKPARQ-------LNENDLDDILAQHEQPLLLVLDGVTDPHNLGACL 114
           KA G  H G +  +   R        +++ D DD +        L L+ V +PHNLGA +
Sbjct: 195 KASGTEHHGGVCFLIKKRNGTTVQQWVSQADADDCV--------LALEDVGNPHNLGAMM 246

Query: 115 RNADAAGVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVG 174
           R+    GV  V++ +D +   +    + A G AE V  +   ++   +   ++ G   V 
Sbjct: 247 RSCAHFGVKGVLL-QDAALLESGAAIRTAEGGAEHVQPITGDSVLDALEQFRKAGYSIVT 305

Query: 175 TAGEATHDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGV 234
           T+  +   ++++ L   + +V+G E DG+      + D  + I   G+V SLNVSVA GV
Sbjct: 306 TSSHSGTPLFKATLPRKMVLVLGQERDGLSDAALSSADLSVSIDGTGNVESLNVSVATGV 365

Query: 235 CLFEAVRQRMA 245
            L E  RQ  A
Sbjct: 366 LLAEWWRQNKA 376