Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., tRNA/rRNA methyltransferase from Dickeya dianthicola ME23

 Score = 77.0 bits (188), Expect = 5e-19
 Identities = 68/242 (28%), Positives = 105/242 (43%), Gaps = 14/242 (5%)

Query: 6   IYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDD---K 62
           +YG +A  A+    P   V  + L+      + P   E +R   + ++      DD   +
Sbjct: 135 VYGENACQALFLSRPEAIVRGWFLQ-----EVTPRFREALRWMAANRKAYHVVEDDELIR 189

Query: 63  AEGANHQGLIA-RVKPARQLNENDLDDILAQH-EQPLLLVLDGVTDPHNLGACLRNADAA 120
           A G  H G +   +K  R L   D+   L++  +   +L L+ V +PHNLG  +R+    
Sbjct: 190 ASGTEHHGGVCFLIKKRRGL---DVAAYLSEAGDTDCVLALEDVGNPHNLGGIMRSCAHF 246

Query: 121 GVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEAT 180
           GV  V+V  D S   +    + A G AE V  +    L   +   +  G   V T+    
Sbjct: 247 GVKGVLV-NDSSQLESGAAVRTAEGGAEHVKAISADGLVDALAQFRAAGYTIVTTSSHKG 305

Query: 181 HDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAV 240
             +    L     IV+G EGDG+     +  D  + I   G+V SLN+SVA G+ L E  
Sbjct: 306 STLSTVSLPAKTVIVLGQEGDGLSDGAWQQGDVKVSIDGTGNVESLNISVATGILLAEWW 365

Query: 241 RQ 242
           RQ
Sbjct: 366 RQ 367