Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., rRNA methylase, putative, group 3 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  124 bits (312), Expect = 1e-33
 Identities = 76/243 (31%), Positives = 132/243 (54%), Gaps = 7/243 (2%)

Query: 4   ELIYGIHAVNAVL--QRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDD 61
           + I+G  AV   L  Q+D  + +   V K   +D +  +L++  +  V +  +    L+ 
Sbjct: 18  DFIFGTRAVMEALHAQKDIDKIL---VNKELNNDLIKELLSQAKQERVPVVRVPEAKLN- 73

Query: 62  KAEGANHQGLIARVKPARQLN-ENDLDDILAQHEQPLLLVLDGVTDPHNLGACLRNADAA 120
           +    NHQG++A +   +  + +N + +  ++   PL+LVLD +TD  N GA  R A+ A
Sbjct: 74  RITRKNHQGVVAHMSAIQYASIDNVITECFSKGVDPLVLVLDRITDVRNFGAIARTAECA 133

Query: 121 GVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEAT 180
           GV A+++P+  +A + +   K + GA   +P+ R  NL   ++ L++ G+  V    +  
Sbjct: 134 GVHAIVIPEKGAAQINSDAVKTSAGALNFLPVCRAKNLHFMVKDLKKMGLNIVSCTEKTE 193

Query: 181 HDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAV 240
             +Y +  T   AI+MG+E DG+        D+ + IPMAG++ SLNVSVA GV ++E +
Sbjct: 194 RKMYDADFTVPTAIIMGSEEDGISEDLMALSDEFVSIPMAGNIESLNVSVASGVLIYEII 253

Query: 241 RQR 243
           RQR
Sbjct: 254 RQR 256