Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., RNA methyltransferase, TrmH family, group 3 from Bacteroides ovatus ATCC 8483

 Score =  137 bits (345), Expect = 2e-37
 Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 3/242 (1%)

Query: 3   NELIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDK 62
           +E+I+G+ AV   LQ       +  V K  Q D    +   L    + +Q +  + ++ +
Sbjct: 5   SEMIFGVRAVIEALQAGK-EIDKILVKKDIQSDLSKELFAALKGTLIPVQRVPVERIN-R 62

Query: 63  AEGANHQGLIARVKPARQLNENDLDDIL-AQHEQPLLLVLDGVTDPHNLGACLRNADAAG 121
               NHQG+IA +         DL   L  Q + P  ++LDGVTD  N GA  R  + A 
Sbjct: 63  ITRKNHQGVIAFISSVTYQKAEDLVPFLFEQGKNPFFVMLDGVTDVRNFGAIARTCECAA 122

Query: 122 VAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATH 181
           V AVI+P   SA + A   K + GA  T+P+ R  NL  T++ L++ G   V    +  +
Sbjct: 123 VDAVIIPVRGSASVNADAVKTSAGALHTLPVCREQNLRSTLQYLKDSGFRIVAATEKGDY 182

Query: 182 DIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAVR 241
           D  ++  TG L I+MGAE  G+       CD+ +KIPM G++ SLNVSVA G+ ++EAV+
Sbjct: 183 DYTKADYTGPLCIIMGAEDTGVSYENLALCDEWVKIPMLGTIESLNVSVAAGILIYEAVK 242

Query: 242 QR 243
           QR
Sbjct: 243 QR 244