Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., tRNA/rRNA metyltransferase from Agrobacterium fabrum C58

 Score =  123 bits (309), Expect = 4e-33
 Identities = 89/242 (36%), Positives = 126/242 (52%), Gaps = 28/242 (11%)

Query: 6   IYGIHAVNAVLQRDPARFVEAYVLK--------GRQDDRLLPVLNELMRLGVSIQEMSRK 57
           +YG+H V A L     + ++  V          G  D +  PV  E+    VS QE+   
Sbjct: 61  LYGLHTVRAALSNPQRQLIKLSVTLNAFARLDIGEADAQPFPV--EI----VSPQEI--- 111

Query: 58  ALDDKAEG--ANHQGLIARVKPARQLNENDLDDILAQHEQPLLLVLDGVTDPHNLGACLR 115
              DK  G  A HQG++   +P   L    LD   A  + PL+LVLD VTDPHN+GA +R
Sbjct: 112 ---DKVLGPEAIHQGVMLETRP---LPVKKLD---ALKKSPLILVLDQVTDPHNVGAIMR 162

Query: 116 NADAAGVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGT 175
           +A A    AVI     S   +  ++K A GA E +P +++TNLA T+  L + G + VG 
Sbjct: 163 SAVAFNAGAVITTIRHSPTESGVLAKSASGALELIPYIQITNLADTLGELHKLGFFSVGL 222

Query: 176 AGEATHDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVC 235
             E    I Q+     +A+V+GAEG G+R+ TRET   L ++ M G + SLNVS A  + 
Sbjct: 223 DSEGPAPIEQTFTGAKIALVLGAEGKGLRQKTRETVSALARLDMPGEIKSLNVSNAAAIA 282

Query: 236 LF 237
           L+
Sbjct: 283 LY 284