Pairwise Alignments

Query, 233 a.a., 30S ribosomal protein S3 from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., 30S ribosomal protein S3 from Xanthobacter sp. DMC5

 Score =  284 bits (726), Expect = 1e-81
 Identities = 140/236 (59%), Positives = 181/236 (76%), Gaps = 5/236 (2%)

Query: 1   MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
           MGQKV+P G+RLGI + W++ WFAN  ++   L  D K+R+ L K+L  A++S++VIERP
Sbjct: 1   MGQKVNPVGLRLGINRTWDSRWFANKGEYGKLLHEDIKIREMLMKQLKQAAVSKVVIERP 60

Query: 61  AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
            K  RVTI++ RPGVVIGKKG D++KLR  V+++      INI E+RKPE+D +LVA+SI
Sbjct: 61  HKKCRVTIYSGRPGVVIGKKGADIDKLRKKVSEMTNSEVFINIVEIRKPEIDARLVAESI 120

Query: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
           A QLERRV FRRAMKRAVQ+AMRLGA+GI++  SGRLGGAEIAR EWYREGRVPLHTLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180

Query: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPK-----ADKPKKQRKG 231
           D+DY T++A TTYG  GVKVWIFKGEIL   P A +  + +     + +P+++ +G
Sbjct: 181 DVDYGTATAFTTYGTCGVKVWIFKGEILEHDPMAQDKRQAEQEAGPSSRPQRRERG 236