Pairwise Alignments

Query, 233 a.a., 30S ribosomal protein S3 from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., SSU ribosomal protein S3p (S3e) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  303 bits (777), Expect = 2e-87
 Identities = 147/233 (63%), Positives = 184/233 (78%), Gaps = 1/233 (0%)

Query: 1   MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
           MGQK++P G RL + + W + W+A+ +DFA  L  D KVR+YL  +L NA++SRIVIERP
Sbjct: 1   MGQKINPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKGKLKNAAVSRIVIERP 60

Query: 61  AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
           AK+ R+TIH+ARPGVVIGKKGED+EKL+  +A   GVP  +NI EVRKPE+D +L+ADSI
Sbjct: 61  AKNARITIHSARPGVVIGKKGEDIEKLKKELAAKLGVPVAVNIEEVRKPEIDAKLIADSI 120

Query: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
             QLE+R+MFRRAMKRA+QNAMRLGA+GIK+  SGRL G EIAR EWYREGRVPLHTLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180

Query: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADKPKKQRKGRK 233
           DIDY TS A TTYG+IGVKVW++KG+ LG   A    AEP+ ++ ++ R  R+
Sbjct: 181 DIDYGTSEAKTTYGIIGVKVWVYKGDTLGRNDAPV-VAEPRVEEERRPRGPRR 232