Pairwise Alignments

Query, 233 a.a., 30S ribosomal protein S3 from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., ribosomal protein S3, bacterial type from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  259 bits (663), Expect = 2e-74
 Identities = 127/234 (54%), Positives = 173/234 (73%), Gaps = 4/234 (1%)

Query: 1   MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
           MGQKV+P G+RLGIVK W++ W+   +DFAD L  D K+R+Y+   +    +++++IER 
Sbjct: 1   MGQKVNPIGLRLGIVKGWDSNWYGG-RDFADKLYEDQKIRKYVYARIPKGGIAKVIIERT 59

Query: 61  AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
            K I +TIHTARPGVVIGK G +V+KL+  + K+     QINI E+++PELD +LV +SI
Sbjct: 60  LKRITLTIHTARPGVVIGKGGAEVDKLKEELKKLTSKDVQINIFEIKRPELDAKLVGESI 119

Query: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
           A QL+ R+ FRRAMK+++   MR+GA+GIK+++SGRLGGAE+ARSE Y+EGR+PLHTLRA
Sbjct: 120 AQQLQARISFRRAMKQSIAATMRVGAEGIKIKLSGRLGGAEMARSEMYKEGRIPLHTLRA 179

Query: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGG---MPAATEAAEPKADKPKKQRKG 231
           DIDYA S A T YG+IG+KVWIFKGE+ G     P A  A E      +++R+G
Sbjct: 180 DIDYAISEAQTVYGIIGIKVWIFKGEVYGKRDLSPNAGIANEKSGGAGRRRREG 233