Pairwise Alignments

Query, 233 a.a., 30S ribosomal protein S3 from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., 30S ribosomal protein S3 from Agrobacterium fabrum C58

 Score =  286 bits (731), Expect = 3e-82
 Identities = 140/241 (58%), Positives = 179/241 (74%), Gaps = 11/241 (4%)

Query: 1   MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
           MGQK++P G RLGI + W++ W+A+T ++   L  D K+R YL KEL  A ++++VIERP
Sbjct: 1   MGQKINPIGFRLGINRTWDSRWYADTAEYGKLLHEDLKIRAYLIKELKQAGIAKVVIERP 60

Query: 61  AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
            K  RVTIH+ARPG++IGKKG D+EKLR  ++++      +NI EVRKPE+D  LVA SI
Sbjct: 61  HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEIDATLVAQSI 120

Query: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
           A QLERRV FRRAMKRAVQ+AMRLGA+GIK+   GRLGGAEIAR+EWYREGRVPLHTLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCGGRLGGAEIARTEWYREGRVPLHTLRA 180

Query: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATE-----------AAEPKADKPKKQR 229
           DIDY T+ A T +G+ G+KVWIFKGEIL   P A+E           A+  + D+P ++R
Sbjct: 181 DIDYGTAEAETAFGICGIKVWIFKGEILEHDPMASERRGLEGDAQGPASRERGDRPDRRR 240

Query: 230 K 230
           +
Sbjct: 241 E 241