Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., Protein translocase subunit SecY from Variovorax sp. SCN45

 Score =  540 bits (1390), Expect = e-158
 Identities = 272/423 (64%), Positives = 334/423 (78%), Gaps = 3/423 (0%)

Query: 18  ELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASI 77
           +L+ RL F++ AL+V+R G+ +P+PGI+   LA LF+ Q+G I+ +FNMFSGGAL R ++
Sbjct: 16  DLRRRLVFLLLALVVYRIGAHIPVPGINPDQLAALFQGQQGGILSLFNMFSGGALSRFTV 75

Query: 78  LALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
            ALGIMPYISASI++QL+T V P   +LKKEGEAGRRKI+QYTRYG L LA FQ+  IA 
Sbjct: 76  FALGIMPYISASIIMQLMTYVLPTFEQLKKEGEAGRRKITQYTRYGALGLALFQSFSIAV 135

Query: 138 GLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAGL 197
            L +    LV+     F L A VSL  G+MFLMWLGEQITERG+GNGISILIFAGI AGL
Sbjct: 136 ALESSAG-LVIAPGFGFRLTAMVSLTAGSMFLMWLGEQITERGLGNGISILIFAGIAAGL 194

Query: 198 PKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVFA 257
           P AIG        G ++ ++ L I  +   V YFVVF+ERGQR+I+VNYA+RQ G KV+ 
Sbjct: 195 PNAIGGLASLVTTGAMNPIIALFIIAVVVLVTYFVVFVERGQRKILVNYARRQVGNKVYG 254

Query: 258 AQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQPL 317
            QS+HLPLK+NMAGVIP IFASSIIL P T+  WF   GE   F W+ DV+ AL PG+P+
Sbjct: 255 GQSSHLPLKLNMAGVIPPIFASSIILLPATVVGWFS-TGEGG-FRWIKDVAGALRPGEPI 312

Query: 318 YVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLA 377
           YV+LYAAAI+FFCFFYTALVFN +ETADNLKKSGAF+PGIRPG+QTA+YIDK++ RLTLA
Sbjct: 313 YVLLYAAAIVFFCFFYTALVFNSKETADNLKKSGAFIPGIRPGDQTARYIDKILVRLTLA 372

Query: 378 GALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHLMSHQYESVLKKA 437
           GA+YITF+CL+PEF+++ +NV FYFGGTSLLI+VVV MDFMAQVQ ++MS QYES+LKKA
Sbjct: 373 GAVYITFVCLLPEFLILKYNVPFYFGGTSLLIIVVVTMDFMAQVQNYMMSQQYESLLKKA 432

Query: 438 NLK 440
           N K
Sbjct: 433 NFK 435