Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., Preprotein translocase secY subunit (TC 3.A.5.1.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  704 bits (1818), Expect = 0.0
 Identities = 363/446 (81%), Positives = 395/446 (88%), Gaps = 5/446 (1%)

Query: 1   MARKPGQDFRSAQSGLSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTI 60
           MA++PG DF+SA+ GL ELK RL FVIGAL+VFR GSF+PIPGIDAAVLA+L EQQ+GTI
Sbjct: 1   MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTI 60

Query: 61  VEMFNMFSGGALERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYT 120
           +EMFNMFSGGAL RASI ALGIMPYISASI++QLLTVVHP LAE+KKEGE+GRRKISQYT
Sbjct: 61  IEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYT 120

Query: 121 RYGTLVLATFQAIGIATGLPNM--VNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITE 178
           RYGTLVLA FQ+IGIATGLPNM  +  LV+     F   A VSLVTGTMFLMWLGEQITE
Sbjct: 121 RYGTLVLAIFQSIGIATGLPNMPGMQGLVMNPGFAFYFTAVVSLVTGTMFLMWLGEQITE 180

Query: 179 RGIGNGISILIFAGIVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERG 238
           RGIGNGISI+IFAGIVAGLP AI  TIEQARQG+LH L+LLL+AVL FAV +FVVF+ERG
Sbjct: 181 RGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERG 240

Query: 239 QRRIVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGES 298
           QRRIVVNYAKRQQGR+V+AAQSTHLPLK+NMAGVIPAIFASSIILFP T+A WFG     
Sbjct: 241 QRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGG--- 297

Query: 299 STFGWLTDVSLALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIR 358
           + + WLT +SL L PGQPLYV+LYA+AIIFFCFFYTALVFNPRETADNLKKSGAFVPGIR
Sbjct: 298 TGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIR 357

Query: 359 PGEQTAKYIDKVMTRLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFM 418
           PGEQTAKYIDKVMTRLTL GALYITFICLIPEFM  A  V FYFGGTSLLIVVVVIMDFM
Sbjct: 358 PGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFM 417

Query: 419 AQVQTHLMSHQYESVLKKANLKGYGR 444
           AQVQT +MS QYES LKKANLKGYGR
Sbjct: 418 AQVQTLMMSSQYESALKKANLKGYGR 443