Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., protein translocase subunit secY/sec61 alpha from Kangiella aquimarina DSM 16071

 Score =  574 bits (1479), Expect = e-168
 Identities = 289/443 (65%), Positives = 349/443 (78%), Gaps = 4/443 (0%)

Query: 1   MARKPGQDFRSAQSGLSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTI 60
           MA  P Q  +    GLSELK RL FV+ A++VFR GSF+P+PG+D +VL    E Q GTI
Sbjct: 1   MALSPQQIAKGG--GLSELKQRLLFVLMAIIVFRIGSFIPVPGVDGSVLQAFLENQGGTI 58

Query: 61  VEMFNMFSGGALERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYT 120
             MFN+FSGGALERAS+ ALGIMPYISASI++Q+L+ V P L E+KKEGE+GRRKI+QYT
Sbjct: 59  FTMFNVFSGGALERASVFALGIMPYISASIIMQILSFVDPRLKEIKKEGESGRRKINQYT 118

Query: 121 RYGTLVLATFQAIGIATGLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERG 180
           RY T+ LAT QA+G++T LP ++  LV      F  IA V+LVTGTMFLMWLGEQITERG
Sbjct: 119 RYLTVALATVQAVGMSTQLPGIIPGLVANPDFSFYFIAVVTLVTGTMFLMWLGEQITERG 178

Query: 181 IGNGISILIFAGIVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQR 240
           IGNGISI+I  GIVAG P+AI Q   QA  G+ ++L +L+  + A AV+YF+V+ ER QR
Sbjct: 179 IGNGISIIILVGIVAGFPQAISQIFGQAYDGDRNILGVLVFGIFALAVVYFIVWFERAQR 238

Query: 241 RIVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESST 300
           RI +NYAKRQQG KVFAAQS+ LP+K+NMAGVIPAIFASSI+LFPGTL  WFG      T
Sbjct: 239 RITINYAKRQQGNKVFAAQSSFLPMKLNMAGVIPAIFASSIVLFPGTLLSWFGSGSGEVT 298

Query: 301 FGWLTDVSLALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPG 360
             WLT ++  L PG+P+Y+MLYA  IIFF FFYTAL  NPR+TADNLKKSGAF+PGIRPG
Sbjct: 299 --WLTTMAQNLQPGKPVYIMLYAVGIIFFAFFYTALTQNPRDTADNLKKSGAFIPGIRPG 356

Query: 361 EQTAKYIDKVMTRLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQ 420
           +QTA+Y+DKV TRLT  GALY+T +CL+PEF+++ +N  FYFGGTSLLI+VVV +DFMAQ
Sbjct: 357 QQTAQYLDKVTTRLTFWGALYMTAVCLMPEFLILIFNYPFYFGGTSLLIIVVVAIDFMAQ 416

Query: 421 VQTHLMSHQYESVLKKANLKGYG 443
           VQ HLMS QY+SVLKKANLK  G
Sbjct: 417 VQAHLMSQQYDSVLKKANLKKQG 439