Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., preprotein translocase subunit SecY from Erwinia tracheiphila SCR3

 Score =  704 bits (1817), Expect = 0.0
 Identities = 362/446 (81%), Positives = 392/446 (87%), Gaps = 5/446 (1%)

Query: 1   MARKPGQDFRSAQSGLSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTI 60
           MA++PG DF+SA+ G  ELK RL FVIGAL+VFR GSF+PIPGIDA VLA+L EQQ+GTI
Sbjct: 1   MAKRPGLDFQSARGGFGELKRRLLFVIGALIVFRIGSFIPIPGIDATVLAKLLEQQRGTI 60

Query: 61  VEMFNMFSGGALERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYT 120
           +EMFNMFSGGAL RASI ALGIMPYISASI++QLLTVVHP LAE+KKEGEAGRRKISQYT
Sbjct: 61  IEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGEAGRRKISQYT 120

Query: 121 RYGTLVLATFQAIGIATGLPNM--VNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITE 178
           RYGTLVL  FQ+IGIATGLPNM  +  LV+     F   A VSLVTGTMFLMWLGEQITE
Sbjct: 121 RYGTLVLGIFQSIGIATGLPNMPGMQGLVLNPGFAFYFTAVVSLVTGTMFLMWLGEQITE 180

Query: 179 RGIGNGISILIFAGIVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERG 238
           RGIGNGISI+IFAGIVAGLP AIG TIEQARQG+LH LLLLL+AVL FAV +FVVF+ERG
Sbjct: 181 RGIGNGISIIIFAGIVAGLPSAIGHTIEQARQGDLHFLLLLLVAVLVFAVTFFVVFVERG 240

Query: 239 QRRIVVNYAKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGES 298
           QRRIVVNYAKRQQGR+V+AAQSTHLPLK+NMAGVIPAIFASSIILFP T+A WFG     
Sbjct: 241 QRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGG--- 297

Query: 299 STFGWLTDVSLALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIR 358
           + + WLT +S+ L PGQPLYV+LYA AIIFFCFFYTALVFNPRETADNLKKSGAFVPGIR
Sbjct: 298 TGWNWLTTISMYLQPGQPLYVLLYATAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIR 357

Query: 359 PGEQTAKYIDKVMTRLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFM 418
           PGEQTAKYIDKVMTRLTL GALYITFICLIPEFM  A  V FYFGGTSLLIVVVVIMDFM
Sbjct: 358 PGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFM 417

Query: 419 AQVQTHLMSHQYESVLKKANLKGYGR 444
           AQVQT +MS QYES LKKANLKGYGR
Sbjct: 418 AQVQTLMMSSQYESALKKANLKGYGR 443