Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., preprotein translocase subunit SecY from Alteromonas macleodii MIT1002

 Score =  712 bits (1838), Expect = 0.0
 Identities = 361/441 (81%), Positives = 401/441 (90%), Gaps = 4/441 (0%)

Query: 4   KPGQDFRSAQSGLSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEM 63
           KPG D   A+SGLSELK+RL FV+GA++VFR GS+VPIPGID AVLA+LFEQQKGTIVEM
Sbjct: 3   KPGLD-SGAKSGLSELKARLLFVLGAIVVFRLGSYVPIPGIDPAVLADLFEQQKGTIVEM 61

Query: 64  FNMFSGGALERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYG 123
           FNMFSGGALERAS+LALGIMPYI+ASI++QLL+VVHP + ELKKEGEAGRRKISQYTRY 
Sbjct: 62  FNMFSGGALERASVLALGIMPYITASIIMQLLSVVHPPMVELKKEGEAGRRKISQYTRYL 121

Query: 124 TLVLATFQAIGIATGLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGN 183
           TLVLA FQ+IGI+TGLPN++N LV+     F   A VSLVTGTMFLMWLGEQITERGIGN
Sbjct: 122 TLVLAIFQSIGISTGLPNLINGLVINPGFGFYFTAVVSLVTGTMFLMWLGEQITERGIGN 181

Query: 184 GISILIFAGIVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIV 243
           GISILIFAGIVAGLP AIGQT EQARQG++++L LLLI V+  A+ Y VVF+ERGQRRIV
Sbjct: 182 GISILIFAGIVAGLPTAIGQTAEQARQGDINLLFLLLIGVIVIALTYLVVFVERGQRRIV 241

Query: 244 VNYAKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGW 303
           VNYAKRQQGR+VFAAQSTHLPLK+N+AGVIP IFASSIILFPGT+A WFGQN  ++   W
Sbjct: 242 VNYAKRQQGRQVFAAQSTHLPLKVNIAGVIPPIFASSIILFPGTIAGWFGQNESTA---W 298

Query: 304 LTDVSLALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQT 363
           L DV+L LSPGQPLYVMLYAAAIIFFCFFYTALVFNPR+TADNLKKSGAF+PGIRPGEQT
Sbjct: 299 LQDVALMLSPGQPLYVMLYAAAIIFFCFFYTALVFNPRDTADNLKKSGAFIPGIRPGEQT 358

Query: 364 AKYIDKVMTRLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQT 423
           ++YIDKVMTRLTLAGALYITFICL+PEFM++AWNV FYFGGTSLLI+VVVIMDFMAQVQT
Sbjct: 359 SRYIDKVMTRLTLAGALYITFICLVPEFMLIAWNVPFYFGGTSLLIIVVVIMDFMAQVQT 418

Query: 424 HLMSHQYESVLKKANLKGYGR 444
           HLMS QYESVLKKANLKGYGR
Sbjct: 419 HLMSSQYESVLKKANLKGYGR 439