Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., Preprotein translocase SECY subunit from Agrobacterium fabrum C58

 Score =  473 bits (1218), Expect = e-138
 Identities = 235/425 (55%), Positives = 317/425 (74%), Gaps = 6/425 (1%)

Query: 18  ELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERASI 77
           +LK RL+F + ALLV+R G+ +P+PG++    A+ F  Q   I+ +FNMF+GGA+ER +I
Sbjct: 22  DLKKRLWFTLAALLVYRLGTHIPLPGLNPEAYAQAFRGQANGILGLFNMFAGGAVERMAI 81

Query: 78  LALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGIAT 137
            ALGIMPYISASI+VQL+T V P+L  LKKEGEAGR+ I+QYTRYGT++L T QA GIA 
Sbjct: 82  FALGIMPYISASIIVQLMTSVVPSLEALKKEGEAGRKIINQYTRYGTVLLGTLQAYGIAV 141

Query: 138 GLPNMVNNLVVIDQTMFTLIATV-SLVTGTMFLMWLGEQITERGIGNGISILIFAGIVAG 196
           GL +   N +V+D  MF  ++TV +L+ GTMFLMWLGEQIT RGIGNGIS++IFAGI AG
Sbjct: 142 GLES--GNGLVVDPGMFFRVSTVITLLGGTMFLMWLGEQITSRGIGNGISLIIFAGIAAG 199

Query: 197 LPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGRKVF 256
           LPKA+  T+E  R G L   L+L++ ++A  VI  +VF+ER QRR+++ Y KRQ G ++F
Sbjct: 200 LPKALAGTLELGRTGALSTPLILMVVIVAIGVIALIVFVERAQRRLLIQYPKRQVGNRMF 259

Query: 257 AAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSPGQP 316
              ++HLPLK+N AGVIPAIFASS++L P T A   G  G ++   W T +  +L  GQP
Sbjct: 260 QGDTSHLPLKLNTAGVIPAIFASSLLLLPATAA---GFAGNTNLPTWATSIIASLQHGQP 316

Query: 317 LYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTL 376
           L++ LY   I FF FFYTA+VFNP++TADNLKK G F+PGIRPGE+TA+YID V+TR+T+
Sbjct: 317 LFMALYGLLIAFFAFFYTAIVFNPKDTADNLKKHGGFIPGIRPGERTAEYIDYVLTRITV 376

Query: 377 AGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHLMSHQYESVLKK 436
            GA+Y+ F+C++PE ++    +    GGTSLLIVV V +D +AQ+Q HL++ QYE ++KK
Sbjct: 377 VGAIYLVFVCILPETLIARTGIPLALGGTSLLIVVSVTLDTVAQIQGHLIAQQYEGLIKK 436

Query: 437 ANLKG 441
           + L+G
Sbjct: 437 SKLRG 441