Pairwise Alignments

Query, 190 a.a., lysine transporter LysM from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 8/128 (6%)

Query: 67  DKQDVAAET--PATSKRIEVGINTQSLSEQRTQAQTAL------KSSAWQEYVVRQGDTL 118
           D  D A  T  PA S   ++  + ++ ++    A + +      K    +E VV +GDTL
Sbjct: 62  DAADAAQATNEPAASPFAQIENSDENAAQTAETAPSPVAPAEKPKEPGHREVVVSKGDTL 121

Query: 119 SQVFRNNELPLTDINALVKVEGSDKPLSQIQAGQLIRFKLAENGQLDILQLERNNQSVMF 178
           S +F    LP   ++ ++  +   K  SQ++ GQ + F+L+  GQL  L  + ++   + 
Sbjct: 122 STLFEKVGLPAASVHEILASDKQAKQFSQLKRGQKLEFELSPEGQLTSLHSKVSDVETIT 181

Query: 179 FRLSDGGF 186
              +D G+
Sbjct: 182 LTKNDKGY 189