Pairwise Alignments

Query, 190 a.a., lysine transporter LysM from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 82.0 bits (201), Expect = 7e-21
 Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 37/186 (19%)

Query: 42  LPPFHRRGLMVLTPAVLVLMVIPLPDKQDVAAET------------PATSKRIEVGINT- 88
           LPP HRRG+++    ++V  ++P  D  +    T            P T +++   + T 
Sbjct: 27  LPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTP 86

Query: 89  ------------QSLSE-------QRTQAQTALKSSA----WQEYVVRQGDTLSQVFRNN 125
                       + + E       Q TQ Q     S     W+ Y V  G T++Q+FR++
Sbjct: 87  QNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDH 146

Query: 126 ELPLTDINALVKVEGSDKPLSQIQAGQLIRFKLAENGQLDILQLER-NNQSVMFFRLSDG 184
            LP TD+ A+ +VEG+ KPLS +Q GQ+++ +   +G +  L ++  NNQ V+F R  DG
Sbjct: 147 GLPATDVYAMAQVEGAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDG 206

Query: 185 GFGRSK 190
            F R++
Sbjct: 207 SFIRAR 212