Pairwise Alignments

Query, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., DEAD/DEAH box helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  280 bits (716), Expect = 7e-80
 Identities = 166/402 (41%), Positives = 237/402 (58%), Gaps = 9/402 (2%)

Query: 5   SFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLS 64
           SF +L L P LL  L   G+   TPIQA ++P  L+G D++   +TG+GKTAAF L +L 
Sbjct: 2   SFDSLGLAPALLRALADYGYTQPTPIQAAAIPPALEGHDLLAAAQTGTGKTAAFALPLLQ 61

Query: 65  NLNVK----RFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSL 120
            L+        R +AL+L PTRELA Q+  ++R  G+ IH +   T+ GG+ MGPQI +L
Sbjct: 62  KLSTSGQTMTRRPRALILTPTRELAAQIHENMRDYGKHIH-VSAATIFGGVGMGPQINAL 120

Query: 121 EHGAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQ 180
             G  +++ TPGR++DHL +  +DLS + TLVLDEADRML+MGF  AL+ I+ + P +RQ
Sbjct: 121 RRGVDVVIATPGRLIDHLQQRTLDLSAVETLVLDEADRMLDMGFLPALKRILQSVPKKRQ 180

Query: 181 TLLFSATYPASIEQIAQSVTRNALMIKVEATHD-TSSIRQYFYKVEGSAARDEALETLLL 239
           TLLFSAT+  +I+ +A     N   I V A +  T+ +    + V+ S  RD  L  +L 
Sbjct: 181 TLLFSATFAPAIKALALDFMHNPREISVSAPNTVTTLVSHQVHPVDASRKRDLLLH-VLS 239

Query: 240 HHQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVA 299
                 ++VF  TK     +   L+ SG     +HG+  Q  R +AL  F +  +++LVA
Sbjct: 240 QDSRRQTLVFSRTKHGADKLVTFLNASGLRAAAIHGNKSQNARTRALADFKSGRVTVLVA 299

Query: 300 TDVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQID 359
           TD+AARG+D++ L  V N+DL    E +VHRIGRTGRAG +GLA S  S +ES  +  I 
Sbjct: 300 TDIAARGIDIEQLPIVINFDLPSVAEDYVHRIGRTGRAGMEGLALSLVSHDESGLLFDIR 359

Query: 360 EYM--DIAIEPSTLPQPAAGARPYAANMVTIQIDGGKKDKVR 399
           + +  DIAI P    +P+A  R  A      Q  GG++ + R
Sbjct: 360 KLLKQDIAITPVAGYEPSAPLRLDAGAPRPKQGGGGQRQQQR 401