Pairwise Alignments

Query, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., ATP-dependent RNA helicase DbpA from Rhodanobacter sp000427505 FW510-R12

 Score =  454 bits (1167), Expect = e-132
 Identities = 239/457 (52%), Positives = 318/457 (69%), Gaps = 3/457 (0%)

Query: 5   SFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLS 64
           +F+ L LKP LLA+++T+G+A MTP+QAQSLP +L+G+DVI Q +TGSGKTAAFGL +L 
Sbjct: 3   TFSTLPLKPALLASVDTLGYAEMTPVQAQSLPPMLQGRDVIAQAQTGSGKTAAFGLSLLQ 62

Query: 65  NLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHGA 124
            L+    R+QALVLCPTRELADQV+  IR L   I N+K+LTLCGGMP+GPQ+ SL H  
Sbjct: 63  ALDADTIRLQALVLCPTRELADQVSKAIRKLAANIPNVKLLTLCGGMPLGPQLASLSHDP 122

Query: 125 HILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLLF 184
           HI+VGTPGR+ +HL +  +    +  LVLDEADRML+MGF EA++ II       QTLLF
Sbjct: 123 HIVVGTPGRVQEHLKRGSLHGGGIKVLVLDEADRMLDMGFSEAIDDIIGRIAKHHQTLLF 182

Query: 185 SATYPASIEQIAQSVTRNALMIKVEA-THDTSSIRQYFYKVEGSAARDEALETLLLHHQP 243
           SATYP  I   +Q V ++ +++ VEA     S+I Q F +VE  A + +AL  LL   + 
Sbjct: 183 SATYPDEIRAASQRVQKDPVVVTVEAPAARRSAIEQQFIEVE-PAQKLDALAQLLAGERG 241

Query: 244 TSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVA 303
             ++VFCN +R+V  VA  L + G+S + LHGDMEQR+RD+ LV+FAN+S ++LVATDVA
Sbjct: 242 QHALVFCNMRRDVDAVAQELDRRGYSALALHGDMEQRDRDEVLVRFANRSCNVLVATDVA 301

Query: 304 ARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEYMD 363
           ARGLD+  L  V +YD++ DP+ H HRIGRTGRAG  GLA +  +  E  + A I+E   
Sbjct: 302 ARGLDIAALPLVLSYDVAHDPDTHTHRIGRTGRAGETGLAITLCTPRERPKAANIEEAQG 361

Query: 364 IAIEPSTLP-QPAAGARPYAANMVTIQIDGGKKDKVRPGDILGALTSDGELTAEHIGKIN 422
           + +   TL   P  G   + A M T+ ID G++DK+RPGDILGALT D  L A+ IGKI+
Sbjct: 362 VPLPWRTLKLAPPRGKTLHLAPMKTLVIDAGRQDKLRPGDILGALTGDAGLEAKDIGKID 421

Query: 423 LFPMRAYVAVHKKIATKALNKIANGKMKGRQFRARLL 459
           +F  RAYVA+ + +A KAL ++  G++KGR FR R L
Sbjct: 422 VFATRAYVAISRALANKALERLRAGRIKGRNFRVRPL 458