Pairwise Alignments

Query, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., ATP-dependent RNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  333 bits (855), Expect = 5e-96
 Identities = 181/457 (39%), Positives = 278/457 (60%), Gaps = 2/457 (0%)

Query: 5   SFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLS 64
           +F  LNL   LL +L  + + + TPIQ Q++P +L+G DV GQ +TGSGKTAAFGL +L 
Sbjct: 3   TFKDLNLSAALLQSLHDLHYTSPTPIQEQAIPLLLQGLDVAGQAETGSGKTAAFGLPLLQ 62

Query: 65  NLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHGA 124
            +  +  +VQALV+ PTRELA QV  +++   R I N+K+    GG     +  SLEH  
Sbjct: 63  RIKPELQQVQALVVVPTRELAVQVRQELKQYARHIPNLKISAFYGGHSFRMEEASLEHPP 122

Query: 125 HILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLLF 184
            +LVGTPGR+ DHLS+  + LS    +VLDEAD++LEMGF+E L+ ++ A P  RQT+LF
Sbjct: 123 QVLVGTPGRLTDHLSRKTLRLSNTAQVVLDEADKLLEMGFEEELDELLRALPRNRQTVLF 182

Query: 185 SATYPASIEQIAQSVTRNALMIKVEATHDTSSIRQYFYKVEGSAARDEALETLLLHHQPT 244
           SAT    ++Q+  +  ++   ++  AT     I  Y  +V+    + +AL  LL      
Sbjct: 183 SATMADDVKQLIANSLKDPKFVQATATALPDRITYYGVQVQ-DEQKKQALAQLLQSIDAA 241

Query: 245 SSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVAA 304
            +VVF N +   + +AD L Q GF+   LHG ++Q ERD+ +  F N + S+LVATD+AA
Sbjct: 242 GTVVFVNARLTTEEIADYLQQYGFAARALHGKLDQMERDKTMTLFRNGTTSVLVATDLAA 301

Query: 305 RGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDE-YMD 363
           RGLD+D L  + +Y+L +  + ++HR GRTGRAG  G  ++F +  E+ ++ Q  E  +D
Sbjct: 302 RGLDIDVLQQIVHYELPQHEDAYLHRSGRTGRAGKSGTVYTFVNSREAQKLEQWQEVQVD 361

Query: 364 IAIEPSTLPQPAAGARPYAANMVTIQIDGGKKDKVRPGDILGALTSDGELTAEHIGKINL 423
             +    +    +     A+ + T+ I GG+KDK+ P DI+GAL ++  L A  IGKI +
Sbjct: 362 KWLNQKDMAPATSAPAVAASALTTLHISGGRKDKLSPRDIVGALIAEVGLAATDIGKIEI 421

Query: 424 FPMRAYVAVHKKIATKALNKIANGKMKGRQFRARLLK 460
               ++VAV +  A++A+ K+ + K+KGR+++   +K
Sbjct: 422 QDRHSFVAVPEGAASRAVRKLNDAKIKGRRYKVSYVK 458