Pairwise Alignments

Query, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score =  252 bits (643), Expect = 3e-71
 Identities = 152/403 (37%), Positives = 227/403 (56%), Gaps = 13/403 (3%)

Query: 5   SFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLS 64
           +F  L L PE+L  L   G+   TPIQAQ++P +L G+DV+G  +TG+GKTA+F L ++ 
Sbjct: 19  TFEDLGLGPEILKALAESGYTHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMIE 78

Query: 65  NLNVKRFRVQ---ALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLE 121
            L   R + +   +L+L PTRELA QVA +    G+  H +K   + GG  M  Q+  L+
Sbjct: 79  ILAAGRAKARMPRSLILAPTRELAAQVAENFDKYGK-YHPLKKALIIGGESMSDQVALLD 137

Query: 122 HGAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQT 181
            G  +L+ TPGR+LD   + RI L+++  LV+DEADRML+MGF   +E I+   P  RQT
Sbjct: 138 RGVDVLIATPGRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKIRQT 197

Query: 182 LLFSATYPASIEQIAQSVTRNALMIKVEATHDTSSIRQYFYKVEGSAARDEALETLLLHH 241
           L FSAT    I ++A +   N   +KV      ++       V     + E L  L+   
Sbjct: 198 LFFSATMGPEIRRLADAFLMNPKEVKVSTGASAATTVVQALAVVEEIDKRETLRHLIRIE 257

Query: 242 QPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATD 301
           +  ++ +FCN KR+V  +  +L + GF V++LHGDM Q  R + L +F      ++V +D
Sbjct: 258 EVKNAFIFCNRKRDVDVLFRSLKKHGFDVVQLHGDMAQSARGETLEKFKKGEARLMVCSD 317

Query: 302 VAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEY 361
           VAARG+D+  +  VFN+D+    E +VHRIGRTGRAG +G AF+  S ++   V  I+  
Sbjct: 318 VAARGIDISAVSHVFNFDVPIHAEDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGAIE-- 375

Query: 362 MDIAIEPSTLPQ-PAAGARPYAANMVTIQIDGGK---KDKVRP 400
              A+  +T+P+    G      +M   +  GG+   KD  RP
Sbjct: 376 ---AMIGTTIPRISVEGVPALDLDMTARKGRGGRGAPKDAKRP 415