Pairwise Alignments

Query, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., ATP-dependent RNA helicase RhlE from Alteromonas macleodii MIT1002

 Score =  253 bits (647), Expect = 7e-72
 Identities = 157/419 (37%), Positives = 231/419 (55%), Gaps = 12/419 (2%)

Query: 5   SFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLS 64
           SF  L L   LL  +E  GF+T +PIQ +++P +L+G+DV+   +TG+GKTA FGL +L 
Sbjct: 2   SFTQLGLAEPLLRAIEKRGFSTPSPIQEKAIPEVLQGKDVLAAAQTGTGKTAGFGLPILQ 61

Query: 65  NLN----VKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSL 120
            L     V    V+AL+L PTRELA QV   IR     +  +K   + GG+ + PQ+  L
Sbjct: 62  RLMEGQPVSGNNVRALILTPTRELAAQVEESIRAFSEFLP-LKTAVVFGGVGINPQMMKL 120

Query: 121 EHGAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQ 180
             G  +L+ TPGR+LD   ++ +  S+L  LVLDEADRML+MGF   ++ ++   P ERQ
Sbjct: 121 RKGVDVLIATPGRLLDLYQQNAVKFSQLEVLVLDEADRMLDMGFIHDIKRVLKLLPQERQ 180

Query: 181 TLLFSATYPASIEQIAQSVTRNALMIKVEATHDT-SSIRQYFYKVEGSAARDEALETLLL 239
           +LLFSAT+   I  +A+++TRN + I     + T  +++Q+   ++ S  +  AL  L+ 
Sbjct: 181 SLLFSATFSDEITALAKTITRNPVSISTAPANTTVEAVQQHLVTIDKSK-KTTALICLIK 239

Query: 240 HHQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVA 299
             +    +VF  TK     +A+ L +S      +HG+  Q  R +AL  F N +I +LVA
Sbjct: 240 QQKWEQVLVFSRTKHGANRIAEKLTRSKIPSAAIHGNKSQGARTKALADFKNGAIKVLVA 299

Query: 300 TDVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQID 359
           TD+AARG+D+  L  V N DL      +VHRIGRTGRAG+ G A+SF    E   +  I+
Sbjct: 300 TDIAARGIDISELPIVVNLDLPNTAADYVHRIGRTGRAGASGQAWSFVCAEELQNLKDIE 359

Query: 360 EYMDIAIEPSTLPQPAAGARPYAANMVTIQIDGGK-KDKVRPGDILGALTSDGELTAEH 417
             +   +   TL     G  P  A  VT      K K   +P    G   S+G+ + E+
Sbjct: 360 TLIQKLLPRETL----EGFEPQQAVPVTTLSKPKKPKKPKKPKAPQGESGSEGKRSGEN 414