Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., macrolide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score = 65.9 bits (159), Expect = 4e-15
 Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 18/230 (7%)

Query: 179 DNLPFTVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESGANLGHQPSAEQLAQRDFTPKQ 238
           +N+PF V+G+LA  G            AI           N  + P    +A  D   ++
Sbjct: 435 ENVPFQVIGVLAEKGAASGNKDSDDRVAIPYTAASVRLFGN--YNPEYVVIAAAD--ARK 490

Query: 239 ITAMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELWGMMSVAEQALMAVSVFVV 298
           +    V +   +Q   L     DY     +A++   A  +    +S+   ++ A+S+ V 
Sbjct: 491 VRETEVAIDQLMQK--LHNGKRDYELTNNAAMIQAEARTQ--NTLSLMLGSIAAISLLV- 545

Query: 299 VAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVLTLVGILLGVSVLYL 358
             G +G+++ +L +++ER RE+ I  A GAR + +    ++EA +L++VG L G++   L
Sbjct: 546 --GGIGVMNIMLMTVRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLCGIA---L 600

Query: 359 LLALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIGFIPALRAYR 408
            L +   L+ ++  +Q +L  +    +   GC  + G+V GF+PA +A R
Sbjct: 601 ALLVGGVLVLAKVAVQFSLLAV----FGAFGCALVTGVVFGFMPARKAAR 646