Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 29/281 (10%)

Query: 132 LTLSQGREFNGLFET----VIGADVAQALGYQVGSQIIIAHGISDVGFSRHDNLPFTVVG 187
           L L QGR  +G        VIG  VAQ+LG   G  + +   +      R ++  F +VG
Sbjct: 140 LALQQGRFLSGFDANETYGVIGDQVAQSLGAP-GDPLRLGDRV------RINDYLFLIVG 192

Query: 188 ILAPTGTPVDKTVHVSLEAIEAIHVGWESGANLGHQPSAEQLAQRDFTPKQITAMLVGLK 247
           IL        + + + ++A E++ +  E    +   P    L  R    + +  +     
Sbjct: 193 ILRSQ----PRAMLMPVQANESLFIPAEGMRRIYATPQIGNLIIRAAPGQDMERI----- 243

Query: 248 SKIQTFALQRQINDYPQEPLSAIMPGVALHELWGMMSVAEQALMAVSVFVVVAGLLGMLS 307
           +K    ALQ Q+ D+    +   +P   +  +          L+A+    +V G +G+++
Sbjct: 244 AKNVAVALQPQLTDHD---VDIQVPQQMIDGMTRQSRTFAYLLLALGAISLVGGGVGVMN 300

Query: 308 SLLTSLQERRREMSILRAMGARPQHVFALLVSEASVLTLVGILLGVSVLYLLLALAAPLI 367
            +L ++ ERRRE+ I  A+GAR + +  L + EA  LT VG L G  +      L A L 
Sbjct: 301 VMLMNVSERRREIGIRMALGARQRDIRNLFLLEAVTLTAVGALCGAVLGLTAAWLYAWLS 360

Query: 368 ASQYGIQIALAGLTAYEWQLLGCVQLAGIVIGFIPALRAYR 408
             ++ + IA   L       +G   L G+  G  PA+ A R
Sbjct: 361 GWEFALAIAALPLG------VGSTLLVGLFFGIYPAVSASR 395