Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 87/436 (19%), Positives = 177/436 (40%), Gaps = 75/436 (17%)

Query: 1   MKVILNLAWKSLLNRKATALLTVLTVA---IAVVLLLGV-ERIRTQAKESFANTISGTDL 56
           M+++L  +W++LL  +  ++L +  ++   I+VV+L+ + E       ESF   +  T +
Sbjct: 1   MRLLLQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQM 60

Query: 57  IVGGRSGQVNLLLYSVFRIGNATNNIDWKSYQEFSQHPAV-KWAI-----PISLGDSHK- 109
           +  G++ +V   + +   I      +     +E +Q P + +++I      +S+      
Sbjct: 61  VASGQTSEVWQGMPARRPI-----QLTESLMREVAQRPEIQRYSIVYENREVSITQQRGT 115

Query: 110 --GFRVLGTNHSYFE----HYRYGSKQPLTLSQGREFNGLFETVIGADVAQALGYQVGSQ 163
             G  V G +  YF         GS+     S   + N     ++G  VA     ++G +
Sbjct: 116 AIGSMVSGVDRGYFSLAGLKLTLGSRD---FSLHDQHNHRRVAILGDHVAATSQLKIGDE 172

Query: 164 IIIAHGISDVGFSRHDNLPFTVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESGANLGHQ 223
             I              + F V+GI+       D++   S    + + +           
Sbjct: 173 FKIR------------GIAFRVIGIMD------DESSRFSFGDNQKVFI----------- 203

Query: 224 PSAEQLAQRDFTPKQITAMLVGLKSKIQTFALQRQINDY--------PQEPLSAIMP--G 273
           PS+     +D    Q   MLV     + ++AL+ Q+           P++  +  +P  G
Sbjct: 204 PSS---TFKDIWDTQPNMMLVLPAQGVSSWALREQLRHTFAQRLHFSPEDQEAVFLPDFG 260

Query: 274 VALHELWGMMSVAEQALMAVSVFVVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHV 333
             +  +  ++   +  L A  +  +  G+LG+ + +  ++ ER RE+ +  A+GA PQ +
Sbjct: 261 SGVAVITAILRGIQAFLAASGMMTMAVGILGVANMMFLAVTERTREIGVRLAIGATPQRI 320

Query: 334 FALLVSEASVLTLVGILLGVSVLYLLLALAAPLIASQYGIQIALAG---LTAYEWQLLGC 390
               + E  +L ++G L+G     LLLA    L+ +  G+   L      +   W  +  
Sbjct: 321 QQQFLLEGLLLVVIGALVG-----LLLAYFGVLLLNHLGLPTWLGEPVITSTTVWLSMLV 375

Query: 391 VQLAGIVIGFIPALRA 406
             +  +   + PA RA
Sbjct: 376 TSILALAAAYFPARRA 391