Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., ABC-type antimicrobial peptide transport system, permease component from Sphingobium sp. HT1-2

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 6/128 (4%)

Query: 279 LWGMMSVAEQALMAVSVFVVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLV 338
           L G  ++  Q + AV+   ++ G +G+++ +L S+ ER RE+ I  A+GA  + V    +
Sbjct: 268 LTGTTTILTQIVAAVAAISLLVGGIGIMNIMLVSVTERTREIGIRLAIGAVAREVLMQFL 327

Query: 339 SEASVLTLVGILLGVSVLYLLLALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVI 398
            EA VL+ +G L+G+ +  +     APL+   +        L A+ +         G+V 
Sbjct: 328 VEAIVLSCMGGLIGLVIALIASVGIAPLMKVPFTFD-PQVNLIAFLFS-----AAIGVVF 381

Query: 399 GFIPALRA 406
           G+ PA RA
Sbjct: 382 GYFPARRA 389