Pairwise Alignments

Query, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 62.4 bits (150), Expect = 4e-14
 Identities = 91/431 (21%), Positives = 174/431 (40%), Gaps = 63/431 (14%)

Query: 5   LNLAWKSLLNRKATALLTVLTVAIAVVLLLGVERIRTQAKESFANTIS--GT---DLIVG 59
           L++AW ++   K   LLT+L + I +  ++ +  +   AK+     I   GT   D+  G
Sbjct: 258 LSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPG 317

Query: 60  GRSGQVNLLLYSVFRIGN--ATNNIDWKSYQEFSQHPAVKWAIPISLGDSHKGFRVLGTN 117
              G  N       +  +  A     W +    S  P+V  ++ +  G+        G +
Sbjct: 318 KDFGDDNPQYRQALKYDDLVAIQKQPWVN----SATPSVSKSLRLRYGNIDIAVNANGVS 373

Query: 118 HSYFEHYRYGSKQPLTLSQGREFNGLFETVIGADVAQAL---GYQVGSQIIIAHGISDVG 174
             YF  Y    ++  T +  ++ +     V+ A+  + L      V  ++++A       
Sbjct: 374 GDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLA------- 426

Query: 175 FSRHDNLPFTVVGILAPTGTPVDKTVHVSLEAIEAIHVGWESGANLGHQPSAEQLAQRDF 234
                N+P  V+G+     +    +  + +         W     L +   ++++  + +
Sbjct: 427 ----GNMPVIVIGVAEEKPSMYGNSNLLQV---------W-----LPYSTMSDRIMGQSW 468

Query: 235 TPKQITAMLVGLKSKIQTFALQRQINDYPQEPLSAIMPGVALHELWGMMSVAEQA----- 289
               + ++ V +K  + +   ++Q+       L  +  G      W M SV + A     
Sbjct: 469 ----LNSITVRVKDGVDSDQAEQQLTR-----LLTLRHGKKDFFTWNMDSVLKTAEKTTY 519

Query: 290 -----LMAVSVFVVVAGLLGMLSSLLTSLQERRREMSILRAMGARPQHVFALLVSEASVL 344
                L  V+V  +V G +G+++ +L S+ ER RE+ I  A+GAR   V    + EA ++
Sbjct: 520 TLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLV 579

Query: 345 TLVGILLGVSVLYLLLALAAPLIASQYGIQIALAGLTAYEWQLLGCVQLAGIVIGFIPAL 404
            LVG  LG+S L + +A    L    + I  +L  L +       C    GI+ G++PA 
Sbjct: 580 CLVGGALGIS-LSMFIAFMLQLFLPGWEIGFSLTALAS----AFLCSTFTGILFGWLPAR 634

Query: 405 RAYRQSLSDGM 415
            A R    D +
Sbjct: 635 NAARLDPVDAL 645